Assembled genome (size, level, N50, BUSCO)
Predicted gene models with CDS / transcript / protein sequences
InterPro, Pfam, PANTHER, GO and KEGG assignments
OrthoFinder orthogroups and TF / ubiquitin families
RNA-seq samples with expression values (TPM)
Positive / negative co-expression edges
scRNA-seq datasets, cell atlas and marker genes
| Assembly name | ASM3687393v1 |
|---|---|
| Assembly level | Scaffold |
| Assembled by | GCA_036873935.1 |
| Genome size | 320.38 |
| Scaffolds | 198447 |
| Contigs | 204582 |
| Scaffold N50 | 2466 |
| Contig N50 | 2291 |
| GC content | 35.5 |
| BUSCO | C:26.6%[S:26.1%,D:0.5%],F:27.7%,M:45.7% |
| Protein-coding genes | - |
| Proteins | - |
| Chromosomes | - |
| WGS accession | JAYJMG01 |
| BioProject | PRJNA1020907 |
| Submitter | Iridian Genomes |
| Year | 2024 |
| Reference | The Genome Sequences of 118 Taxonomically Diverse Eukaryotes of the Salish Sea Biodiversity Genomes [link] |
Availability shown here is recomputed from the live database every hour (last built 2026-09-18 00:21). If a data type is listed as unavailable for Stomotoca atra, it has not been generated for this species in the current release — the coverage matrix shows the equivalent row alongside every other species, and the statistics page gives the site-wide totals.
