Detailed information of HSymV2.0_g02.02750_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_2:1531632...1531994
NR annotation: MBQ4874904.1, 30S ribosomal protein S11 [Rickettsiaceae bacterium H1]
Species abbreviation HSYMB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A9KJG8Small ribosomal subunit protein uS11 OS=Lachnoclostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) OX=357809 GN=rpsK PE=3 SV=1
B7L0S7Small ribosomal subunit protein uS11 OS=Methylorubrum extorquens (strain CM4 / NCIMB 13688) OX=440085 GN=rpsK PE=3 SV=1
A9W4R7Small ribosomal subunit protein uS11 OS=Methylorubrum extorquens (strain PA1) OX=419610 GN=rpsK PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005576 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00411
all species →		Ribosomal_S11Ribosomal protein S11FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036967
all species →		Homologous_superfamilySmall ribosomal subunit protein uS11 superfamilyInterproscan
IPR001971
all species →		FamilySmall ribosomal subunit protein uS11Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11759
all species →		40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003735
all species →		Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840
all species →		Cellular ComponentribosomeInterproscan
GO:0006412
all species →		Biological ProcesstranslationInterproscan
GO:0005763
all species →		Cellular Componentmitochondrial small ribosomal subunitInterproscan
GO:0032543
all species →		Biological Processmitochondrial translationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HSymV2.0_g02.02750_t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP