Detailed information of HSymV2.0_g03.05828_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_3:28307731...28318881
NR annotation: XP_047131126.1, nicastrin [Hydra vulgaris]
Species abbreviation HSYMB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P57716Nicastrin OS=Mus musculus OX=10090 GN=Ncstn PE=1 SV=3
Q8CGU6Nicastrin OS=Rattus norvegicus OX=10116 GN=Ncstn PE=1 SV=1
Q92542Nicastrin OS=Homo sapiens OX=9606 GN=NCSTN PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005898 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18266
all species →		Ncstrn_smallNicastrin small lobeDomainInterproscan
PF05450
all species →		NicastrinNicastrinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041084
all species →		DomainNicastrin, small lobeInterproscan
IPR008710
all species →		FamilyNicastrinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21092
all species →		NICASTRINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005887
all species →		Cellular Componentplasma membraneInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016485
all species →		Biological Processprotein processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K06171NCSTN; nicastrin-Alzheimer diseaseko05010deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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