Detailed information of HSymV2.0_g05.09499_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_5:25600959...25609892
NR annotation: XP_047132689.1, E3 ubiquitin-protein ligase MARCHF6 [Hydra vulgaris]
Species abbreviation HSYMB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O60337E3 ubiquitin-protein ligase MARCHF6 OS=Homo sapiens OX=9606 GN=MARCHF6 PE=1 SV=2
Q6ZQ89E3 ubiquitin-protein ligase MARCHF6 OS=Mus musculus OX=10090 GN=Marchf6 PE=2 SV=2
Q5R9W1E3 ubiquitin-protein ligase MARCHF6 OS=Pongo abelii OX=9601 GN=MARCHF6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005387 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05030
all species →		SSXTSSXT protein (N-terminal region)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR007726
all species →		DomainSS18, N-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13145
all species →		SSM4 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030176
all species →		Cellular Componentobsolete integral component of endoplasmic reticulum membraneInterproscan
GO:0030433
all species →		Biological Processobsolete ubiquitin-dependent ERAD pathwayInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10661MARCH6, DOA10; E3 ubiquitin-protein ligase MARCH6EC:2.3.2.27
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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