Detailed information of HSymV2.0_g12.21041_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_12:9080886...9090473
NR annotation: XP_012558511.2, SAP domain-containing ribonucleoprotein [Hydra vulgaris]
Species abbreviation HSYMB · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006076 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02037
all species →		SAPSAP domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003034
all species →		DomainSAP domainInterproscan
IPR036361
all species →		Homologous_superfamilySAP domain superfamilyInterproscan
IPR052240
all species →		FamilySAP domain-containing ribonucleoproteinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46551
all species →		SAP DOMAIN-CONTAINING RIBONUCLEOPROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0016973
all species →		Biological Processpoly(A)+ mRNA export from nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K18732SARNP, CIP29, THO1; SAP domain-containing ribonucleoprotein-Messenger RNA biogenesisko03019deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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