Detailed information of HSymV2.0_g13.22341_t1 in Hydractinia symbiolongicarpus

Genomic Location: HiC_scaffold_13:6944664...6950877
NR annotation: XP_047141687.1, somatomedin-B and thrombospondin type-1 domain-containing protein [Hydra vulgaris]
Species Hydractinia symbiolongicarpus · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007137 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF19028
all species →		TSP1_spondinSpondin-like TSP1 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000884
all species →		RepeatThrombospondin type-1 (TSP1) repeatInterproscan
IPR036383
all species →		Homologous_superfamilyThrombospondin type-1 (TSP1) repeat superfamilyInterproscan
IPR039942
all species →		FamilySomatomedin-B and thrombospondin type-1 domain-containing proteinInterproscan
IPR044004
all species →		DomainSpondin-like TSP1 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR20920
all species →		RPE-SPONDINInterproscan

 Gene Ontology
No Gene Ontology signature was detected for HSymV2.0_g13.22341_t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for HSymV2.0_g13.22341_t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP