Detailed information of KAL9953056.1 in Oculina patagonica

Genomic Location: chr13:13175679...13180791
NR annotation: XP_020631845.1, hydroxyacyl-thioester dehydratase type 2, mitochondrial-like isoform X1 [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P86397Hydroxyacyl-thioester dehydratase type 2, mitochondrial OS=Homo sapiens OX=9606 GN=HTD2 PE=1 SV=1
C5AZ743-hydroxybutyryl-CoA dehydratase OS=Methylorubrum extorquens (strain ATCC 14718 / DSM 1338 / JCM 2805 / NCIMB 9133 / AM1) OX=272630 GN=croR PE=4 SV=1
Q2RQ36(R)-specific enoyl-CoA hydratase OS=Rhodospirillum rubrum (strain ATCC 11170 / ATH 1.1.1 / DSM 467 / LMG 4362 / NCIMB 8255 / S1) OX=269796 GN=phaJ PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0011492 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01575
all species →		MaoC_dehydratasMaoC like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050965
all species →		FamilyUPF0336/Enoyl-CoA hydratase-relatedInterproscan
IPR002539
all species →		DomainMaoC-like dehydratase domainInterproscan
IPR029069
all species →		Homologous_superfamilyHotDog domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43437
all species →		HYDROXYACYL-THIOESTER DEHYDRATASE TYPE 2, MITOCHONDRIAL-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005739
all species →		Cellular ComponentmitochondrionInterproscan
GO:0006633
all species →		Biological Processfatty acid biosynthetic processInterproscan
GO:0019171
all species →		Molecular Function(3R)-hydroxyacyl-[acyl-carrier-protein] dehydratase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K22540HTD2; 3-hydroxyacyl-thioester dehydratase, animal typeEC:4.2.1.-
Fatty acid biosynthesisko00061deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP