Detailed information of KAL9954291.1 in Oculina patagonica

Genomic Location: chr13:29602939...29641293
NR annotation: CAH3159908.1, unnamed protein product [Pocillopora meandrina]
Species Oculina patagonica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P50748Kinetochore-associated protein 1 OS=Homo sapiens OX=9606 GN=KNTC1 PE=1 SV=1
Q8C3Y4Kinetochore-associated protein 1 OS=Mus musculus OX=10090 GN=Kntc1 PE=1 SV=2
Q20849Kinetochore-associated protein rod-1 OS=Caenorhabditis elegans OX=6239 GN=rod-1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002425 (this species only)

 Pfam domain
No Pfam domain signature was detected for KAL9954291.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR052802
all species →		FamilyKinetochore-associated RZZ complex proteinInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15688
all species →		KINETOCHORE-ASSOCIATED PROTEIN 1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000070
all species →		Biological Processmitotic sister chromatid segregationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005828
all species →		Cellular Componentkinetochore microtubuleInterproscan
GO:0007094
all species →		Biological Processmitotic spindle assembly checkpoint signalingInterproscan
GO:0031267
all species →		Molecular Functionsmall GTPase bindingInterproscan
GO:1903394
all species →		Biological Processprotein localization to kinetochore involved in kinetochore assemblyInterproscan
GO:1990423
all species →		Cellular ComponentRZZ complexInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K20178VPS8; vacuolar protein sorting-associated protein 8-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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