Detailed information of KAL9956749.1 in Oculina patagonica

Genomic Location: chr12:22787540...22790882
NR annotation: CAH3037056.1, unnamed protein product [Porites lobata]
Species Oculina patagonica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8RXU4Low-specificity L-threonine aldolase 1 OS=Arabidopsis thaliana OX=3702 GN=THA1 PE=1 SV=1
Q9FPH3Probable low-specificity L-threonine aldolase 2 OS=Arabidopsis thaliana OX=3702 GN=THA2 PE=1 SV=1
O07051L-allo-threonine aldolase OS=Aeromonas jandaei OX=650 GN=ltaA PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003569 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01212
all species →		Beta_elim_lyaseBeta-eliminating lyaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015422
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, small domainInterproscan
IPR015421
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferase, major domainInterproscan
IPR001597
all species →		DomainAromatic amino acid beta-eliminating lyase/threonine aldolaseInterproscan
IPR015424
all species →		Homologous_superfamilyPyridoxal phosphate-dependent transferaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48097
all species →		L-THREONINE ALDOLASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006520
all species →		Biological Processamino acid metabolic processInterproscan
GO:0016829
all species →		Molecular Functionlyase activityInterproscan
GO:0005829
all species →		Cellular ComponentcytosolInterproscan
GO:0006545
all species →		Biological Processglycine biosynthetic processInterproscan
GO:0006567
all species →		Biological Processthreonine catabolic processInterproscan
GO:0008732
all species →		Molecular FunctionL-allo-threonine aldolase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAL9956749.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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