Detailed information of KAL9958299.1 in Oculina patagonica

Genomic Location: chr11:9754949...9782222
NR annotation: XP_020607232.1, NEDD8 ultimate buster 1-like isoform X1 [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9Y5A7NEDD8 ultimate buster 1 OS=Homo sapiens OX=9606 GN=NUB1 PE=1 SV=2
P54729NEDD8 ultimate buster 1 OS=Mus musculus OX=10090 GN=Nub1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008077 (this species only)
Ubiquitin familyUBD|Alpha-Helix|UBA · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_Other · all ubiquitin genes in this species
Ubiquitin familyULD|UFD/UBQ|UBQ_PIM · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF18037
all species →		Ubiquitin_5Ubiquitin-like domainDomainInterproscan
PF16678
all species →		HOIP-UBAHOIP UBA domain pairFamilyInterproscan
PF00627
all species →		UBAUBA/TS-N domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR041207
all species →		DomainNEDD8 ultimate buster 1, ubiquitin-like domainInterproscan
IPR009060
all species →		Homologous_superfamilyUBA-like superfamilyInterproscan
IPR039749
all species →		FamilyNEDD8 ultimate buster 1Interproscan
IPR032065
all species →		DomainE3 ubiquitin-protein ligase RNF31, UBA-like domainInterproscan
IPR015940
all species →		DomainUbiquitin-associated domainInterproscan
IPR029071
all species →		Homologous_superfamilyUbiquitin-like domain superfamilyInterproscan
IPR000626
all species →		DomainUbiquitin-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12948
all species →		NEDD8 ULTIMATE BUSTER-1 BS4 PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:2000058
all species →		Biological Processregulation of ubiquitin-dependent protein catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAL9958299.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP