Detailed information of KAL9965379.1 in Oculina patagonica

Genomic Location: chr8:27592971...27601786
NR annotation: XP_020602352.1, bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial-like [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6ZHE5D-cysteine desulfhydrase 1, mitochondrial OS=Oryza sativa subsp. japonica OX=39947 GN=DCD1 PE=1 SV=2
F4HYF3Bifunctional D-cysteine desulfhydrase/1-aminocyclopropane-1-carboxylate deaminase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=DCD PE=1 SV=1
Q9WY68Putative 1-aminocyclopropane-1-carboxylate deaminase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=TM_0225 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001402 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00291
all species →		PALPPyridoxal-phosphate dependent enzymeFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001926
all species →		DomainTryptophan synthase beta chain-like, PALP domainInterproscan
IPR036052
all species →		Homologous_superfamilyTryptophan synthase beta chain-like, PALP domain superfamilyInterproscan
IPR027278
all species →		Family1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydraseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43780
all species →		1-AMINOCYCLOPROPANE-1-CARBOXYLATE DEAMINASE-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0019148
all species →		Molecular FunctionD-cysteine desulfhydrase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAL9965379.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP