Gene detail

Detailed information of KAL9966846.1 in Oculina patagonica

Genomic Location: chr7:11615427...11639079
NR annotation: XP_022792362.1, chymotrypsinogen B-like [Stylophora pistillata]
Species Oculina patagonica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-ACROYT_G024976.t0

ATGGAGGCTTCgagtgaaaaaacaacatgcagTGAAGATTCCTCGAAAGTAAAGGTcgataaattgaaaaattatttgcgaGAGAGAGGTATTCAATTAAGCGATGGTGgcaaagaaaaacgaaaagctGAATTGCTTGATTTATGCCAGAAAGCAGCGGCAATGAAGCAGAGGAAACTGGATGATTCTGCCGAAGACCGCACAAAGCTACTGGAGGACAAATTGCAAACAAGTGAATGGAAGTTGCCAGACCCTAAAACTTTGAGCGCTTGGACCCACAACTTCTCGAAAATTCCAGAGTTCACGTTCGGAGACCTTTACAATTATTTGGTGTACCAGGCTGAGAAGACAGAGTGCTTAGACGTTCGCAGGACAGACATGACTTTGAACTGTGGGATTCTTCTGTTGATCGTAACCTGTTGCATTGTTTATTGCAATGCAGCAAGTTTACACACGAACAAATGCAGCAAGGAACAGCCGTGCGCTAATGAGGGAGCCTGTGTTAAACGTGACGGCTTTTATGAATGCGTGTGCCCAAAGGACTTTTCAGGAGACCTGTGCCAAACAAAGCAAGGGAATGTTTCAGAGCAATCGGACGCTCCTGGATCTCAACATTTGTCTAAACGTTTAGCGGgtGCATTTGGCGCAATTCCACCCCCTCCATTCAAAAGAGTTATTCAAGGGCAGCCAGCACTTCACCCTTTTGCCTGGCCCTGGGTGTTGTCTATCAAATATCTTGGTCAACATGGCTGCGGTGCTTCACTTATCGCTGATGAATGGGCAGTCACAGCAGCTCATTGTTTCTATGACAAAAACAGTCAATTGGTTAATCTGCAGCTAATTGATGTGGTCGGCGgagCTAAGAGTAGACTTGGCCTAGAGGGGATACCATTTAAAATTGCAGAAGTGGTGATTCATCCATGGTACATTCATAATCCTATGTTAATCGGCCCGTTTGATATTGCCCTTATAAGGCTTGCTGGTAGGACATTAAATTTTCCGTTTGCACTTTTGCCTGCTAGCGGAACACCAGTACCAAACGGTCTTTGCGGGGTTGCGGGTTGGGGCCATGCACTTGTGGCAGGGCCGTTCAAATTCGATCCCTTAGTTCTCCAAGAAACCCCACTGCCTATCCAGGACACCTCTCAATGTCAAAGTATTGCCGATCCCCGTCTTCAGCTGTGTGCTGGAGGAGCAGGAACGAGTGCATGCAAAGGCGATAGCGGAGGTCCTTTGTCTTGTTTCGACAATGGTGTATGGGTCCTTGAGGGAATCACTTCCTCTGGACGCGACGATTGCTTTCCTTTTGTACCCAGTGTGTTCACTCGGGTTAGTTCTTTTGTGGACTGGATCGGCTCCACTATAGCAGGTCGTTGATTTTTCCAAGGCTTACAGTGGTAATGTAATGAAGCAACCGTGGTGTAGAAGATAACAATCATTACATAATACTTAGAGTAAAAGTCAAACGTGAGGAAAAAGGGCGCTTTTggaccacaggcggcccaagctcactaCGTGAATATTCATAAAGTTTAAGCGAACTTGACTCTTGGCTTCGAGTGGTGTTGTGtcacaaagatgcgatttatacgGATTTGTACGGGAACTCGACTATTTTGGTTCAAAAGatataaaatttaataatctGTAAATAAAATCGACTCACCTTGTTTCCATGttgtcttttttgttatttgcctGTGTCTCAGCAGCGCTactcaccgaaaacgcttcaaaacGGACTGAGACACaggcaaacaacaaagaatacaacatgCAAACAAGATAAGTCGATTTTATTCAcagattatttatttttataccttTTGAACCAAGATCGTAgagttcccatacaaatcctaataaatcgaatctttgtaacacaacaccacTCGAAGCCAAGAGTCACGTTCGCTTAAACTTTATGAACAATTCACGtagtgagcttgggccgcctgtgtttggacaaaacatcaaattttgcaACATGGTTTGCAACATTTTCATGTATTTTCTTTATCCGTTTTTTCActtattcaagttttttttatttcagtttgtttgtttagaACGGCGTTCAAGCCAGAATACGCAAACCTTTAGATAAACATAAGTTTTTTTACATTACATTTCTGAAATGCAGAGGCTTCTTTCCCTGCTTTAGTCATCTTTTGTGCCGATAGGTAAGCCGTTATTATTGTAGTTAACTGACCTTGCTTTTTGCAAATCTCCCCGCCCTGAACTGCCTTCTCATTTTACTTCAAGGTTGTTGGCTTTCCTTGGGTTTTTTAAGTCGTTGTTTTAGTTTCTAGGAAGTAATGGCTGGGTTATGGTTACTGTGTTAGAAGCTGTACCCATCCCCGTTCAGTTTTGAACTACTATATCACTTGTGATTTCGTTTTACGGAATGCCGCTTCCAATCCAAATCTTTGAATTTGTGGCTTCCTTTAATTTGACACTTGAACTGCGTTCAGCCATTACTTCAATATACgtattttcattttatattgGTGTCTTGtgtttgaaacaaaaagaaaaaaaaacgttaaaagatccaaaaatcttaaaaaaaaaacaattaaccgcattttgttttcaatttacattgtttcttcattttttcccCTTGTCACTGGGAGGCAACGTCTCAAAGCGGGAAATGATAATGTGTTGAAGCTTTTTTTAGATTTAAGAGTCCGTTTTTTATTTGCTTGCTTTAATACTTTGTTGCTGTATTAACAGACAAAGCAACTTGTCATTCCAATTCGCTTATATATCAGTTCAACTGTAaccaaaatttttcactggctaTAAGCACAAATCCAGAATATTTTTTTGATACGAGTTCCACCTTATGATCACTAAGGAAATTGCTTCTTGTTAAGAAACTAAAATTGAAACAGGGTCGAGTTCATTTCATTGCCCTTCACGAAGCAAACATCATTTTGATTGTTCCATTTGATGACTTTAATATAGCTTTTAAATGTTTCCAACAGTGTTTTTGAACACATCAGCGATATTAGAATGACAAGAACTTTGTTATAGTTGTCTTAGTTTGAAGAAACAATTTGTGTGATGTTTTATGTAAGTTTTAGGTGACCGCTTGAAGAGTAGACTTTcttagaataaaaacgttgcCTGTATGGCGAAATAACCGCTGAAACCTAAGGCTGACCTAGTAGCGAAAATATTTACTCAATCCAATATAGTTTTGTTCCTTgaagttttttttcaaaaaaggtcAGGATCGCATTCGCTTACTCCTGACGCATTGTTTCCAGTCACTGCAGTGATTGATACCTAACTTCCAACAGAAGCTACAGAAATGACGACACGTAgtaattgaccaatcacagctcACCAGAGCGGGAACGCAATGTGTTTGATCTTGAGCATCAGTTTTTATACAACGTTTAATCAGTTACAAAGTGACCTAAATGTAAAGTCAGg

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08217	Chymotrypsin-like elastase family member 2A OS=Homo sapiens OX=9606 GN=CELA2A PE=1 SV=1
P05805	Proproteinase E OS=Bos taurus OX=9913 PE=1 SV=2
P00774	Chymotrypsin-like elastase family member 2A OS=Rattus norvegicus OX=10116 GN=Cela2a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013721 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00008 all species →	EGF	EGF-like domain	Domain	Interproscan
PF00089 all species →	Trypsin	Trypsin	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001254 all species →	Domain	Serine proteases, trypsin domain	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR001314 all species →	Family	Peptidase S1A, chymotrypsin family	Interproscan
IPR043504 all species →	Homologous_superfamily	Peptidase S1, PA clan, chymotrypsin-like fold	Interproscan
IPR033116 all species →	Active_site	Serine proteases, trypsin family, serine active site	Interproscan
IPR009003 all species →	Homologous_superfamily	Peptidase S1, PA clan	Interproscan
IPR018114 all species →	Active_site	Serine proteases, trypsin family, histidine active site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24253 all species →	TRANSMEMBRANE PROTEASE SERINE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004252 all species →	Molecular Function	serine-type endopeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAL9966846.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.