Detailed information of KAL9970425.1 in Oculina patagonica

Genomic Location: chr6:25965376...25966744
NR annotation: XP_031570675.1, LOW QUALITY PROTEIN: uncharacterized protein LOC116304999 [Actinia tenebrosa]
Species abbreviation OPATA · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P10477Cellulase/esterase CelE OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=celE PE=1 SV=2
P28623Endoglucanase D OS=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) OX=573061 GN=engD PE=1 SV=2
P28621Endoglucanase B OS=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) OX=573061 GN=engB PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002337 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00150
all species →		CellulaseCellulase (glycosyl hydrolase family 5)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050386
all species →		FamilyGlycosyl Hydrolase 5 (Cellulase A)Interproscan
IPR017853
all species →		Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan
IPR001547
all species →		DomainGlycoside hydrolase, family 5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31297
all species →		GLUCAN ENDO-1,6-BETA-GLUCOSIDASE BInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005576
all species →		Cellular Componentextracellular regionInterproscan
GO:0006073
all species →		Biological Processobsolete cellular glucan metabolic processInterproscan
GO:0008422
all species →		Molecular Functionbeta-glucosidase activityInterproscan
GO:0009251
all species →		Biological Processglucan catabolic processInterproscan
GO:0009986
all species →		Cellular Componentcell surfaceInterproscan
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan
GO:0071704
all species →		Biological Processobsolete organic substance metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for KAL9970425.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP