Gene detail

Detailed information of KAL9972852.1 in Oculina patagonica

Genomic Location: chr5:17996705...17997885
NR annotation: XP_020616026.1, uncharacterized protein LOC110054040 [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P32320	Cytidine deaminase OS=Homo sapiens OX=9606 GN=CDA PE=1 SV=2
P56389	Cytidine deaminase OS=Mus musculus OX=10090 GN=Cda PE=1 SV=2
Q54I82	Probable cytidine deaminase OS=Dictyostelium discoideum OX=44689 GN=cda PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007505 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00383 all species →	dCMP_cyt_deam_1	Cytidine and deoxycytidylate deaminase zinc-binding region	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006262 all species →	Family	Cytidine deaminase, homotetrameric	Interproscan
IPR016193 all species →	Homologous_superfamily	Cytidine deaminase-like	Interproscan
IPR002125 all species →	Domain	Cytidine and deoxycytidylate deaminase domain	Interproscan
IPR050202 all species →	Family	Cytidine and Deoxycytidylate Deaminase	Interproscan
IPR016192 all species →	Binding_site	APOBEC/CMP deaminase, zinc-binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11644 all species →	CYTIDINE DEAMINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004126 all species →	Molecular Function	cytidine deaminase activity	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0009972 all species →	Biological Process	cytidine deamination	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0016787 all species →	Molecular Function	hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAL9972852.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.