Gene detail

Detailed information of KAL9980725.1 in Oculina patagonica

Genomic Location: chr3:10455742...10461479
NR annotation: XP_020624248.1, ARF GTPase-activating protein GIT2-like [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14161	ARF GTPase-activating protein GIT2 OS=Homo sapiens OX=9606 GN=GIT2 PE=1 SV=2
Q9Z272	ARF GTPase-activating protein GIT1 OS=Rattus norvegicus OX=10116 GN=Git1 PE=1 SV=1
Q68FF6	ARF GTPase-activating protein GIT1 OS=Mus musculus OX=10090 GN=Git1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004494 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08518 all species →	GIT_SHD	Spa2 homology domain (SHD) of GIT	Family	Interproscan
PF12205 all species →	GIT1_C	G protein-coupled receptor kinase-interacting protein 1 C term	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013724 all species →	Domain	GIT, Spa2 homology (SHD) domain	Interproscan
IPR047161 all species →	Family	ARF GTPase-activating protein Git-like	Interproscan
IPR022018 all species →	Domain	ARF GTPase-activating protein GIT1, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46097 all species →	G PROTEIN-COUPLED RECEPTOR KINASE INTERACTING ARFGAP	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005096 all species →	Molecular Function	GTPase activator activity	Interproscan
GO:0007420 all species →	Biological Process	brain development	Interproscan
GO:0008277 all species →	Biological Process	regulation of G protein-coupled receptor signaling pathway	Interproscan
GO:0031267 all species →	Molecular Function	small GTPase binding	Interproscan
GO:0032012 all species →	Biological Process	regulation of ARF protein signal transduction	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAL9980725.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.