Gene detail

Detailed information of KAL9981127.1 in Oculina patagonica

Genomic Location: chr3:14903273...14907589
NR annotation: XP_020622318.1, sphingomyelin phosphodiesterase-like [Orbicella faveolata]
Species abbreviation OPATA · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0VD19	Sphingomyelin phosphodiesterase OS=Bos taurus OX=9913 GN=SMPD1 PE=2 SV=1
P17405	Sphingomyelin phosphodiesterase OS=Homo sapiens OX=9606 GN=SMPD1 PE=1 SV=5
Q04519	Sphingomyelin phosphodiesterase OS=Mus musculus OX=10090 GN=Smpd1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005739 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19272 all species →	ASMase_C	Acid sphingomyelin phosphodiesterase C-terminal region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029052 all species →	Homologous_superfamily	Metallo-dependent phosphatase-like	Interproscan
IPR045473 all species →	Domain	Sphingomyelin phosphodiesterase, C-terminal domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10340 all species →	SPHINGOMYELIN PHOSPHODIESTERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0008081 all species →	Molecular Function	phosphoric diester hydrolase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01128	SMPDL3; sphingomyelin phosphodiesterase acid-like 3	EC:3.1.4.-	Enzymes with EC numbers	-	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.