Gene detail

Detailed information of KAL9987322.1 in Oculina patagonica

Genomic Location: chr1:18301020...18306061
NR annotation: XP_020603186.1, 60S ribosomal protein L36-like [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4PM12	Large ribosomal subunit protein eL36 OS=Ixodes scapularis OX=6945 GN=RpL36 PE=3 SV=1
Q9Y3U8	Large ribosomal subunit protein eL36 OS=Homo sapiens OX=9606 GN=RPL36 PE=1 SV=3
P47964	Large ribosomal subunit protein eL36 OS=Mus musculus OX=10090 GN=Rpl36 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008992 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01158 all species →	Ribosomal_L36e	Ribosomal protein L36e	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000509 all species →	Family	Large ribosomal subunit protein eL36	Interproscan
IPR038097 all species →	Homologous_superfamily	Large ribosomal subunit protein eL36 domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10114 all species →	60S RIBOSOMAL PROTEIN L36	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0002181 all species →	Biological Process	cytoplasmic translation	Interproscan
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02920	RP-L36e, RPL36; large subunit ribosomal protein L36e	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.