Gene detail

Detailed information of KAL9987779.1 in Oculina patagonica

Genomic Location: chr1:24978691...24989962
NR annotation: XP_020601111.1, phosphatidylinositol 4-kinase beta-like [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

rna-ACROYT_G002140.t0

AATTGCAGCTGCAGATGTTCTTCCTTCAAAACCTTCACGTAAACTGTTTACAGGCAGAAATCGGCGGATTTATTCCCTTGTGGCTACACTATCAACAGGAGACAACAACTAGACGGTTTTCTTCAAGCAGCACTTTGTATTAGAGTGGGAGTCAACCAGAAAATGATTGAAACATGAAAAGGTGAAAAGGAGGTGGACCGAAAATTGTCATTTGAGTCAAGAGTGTATCTCGCTTCATTGAACCATTGGATTTTCGCGTGTTTCTGGAGTAGTTCTGGCGATTTTACGAGCACGTAAAGGGTTTCGACTTCAATTTTGGAAAGCGCTGTAAGTGTGAAAGGTTCTAGGAGAAAAGCAACGTCTTGTGCTGGCAAATTCTACTTCGCCTTGGCCGGCCACTACAACATCAAGTTCACTTCCGATTTGGATACTAGCGCTGTTCTGCGTGTCTTCACGCAATAAAAATTTCTTTGTCTGGTGTTGACACTTTTGGCGACTCTATCGACTGGTACTTACAAATTTATGGTCCGTTTGGAAAAGGAGGAAAGAGCTTATTGCAGTCAGAGCTTACTGCGTTTTTATACATTGGGACATCAAGACGTTTTTTCTGTCATCGAGACAAATAAACTTTCTAGAGAAAACGTGATTAGTCGAATTTTCACCGTTTCGCAAGAAAGGGGTTAAAGGTCTGGAGCTTTAAAAGTGACTTACGTAGAAGCCTAGTAGCCCTGTATGCTGTTTTGATGCTTTAATTTATTGAACCAGGCTTACATTCGTGTATTGATGTTACATTGTGTGCCCTAAATGTGGCAGAAACTCAATATAAGGTTACAATTGACTTGTCTTGGAGTTGCATGTGCAACACGCTGAAGAAACATAGCTGTAATGACAGAAAGTCCAGTATGTTGTACTGCACAACCAACCCCTTCCTCTCCAAATTCTAACCCATTCAAATCTTGGCAAGATGTTGTTGAAGTTGACTTGCAAGCAAATGAGATAATTATACCTGTGAACAATAACCCCAATGAAAATCTTGGGGCTCACTCTCTTCACAACGGAAATGCTTCTCATACAGAGATAGACTCACAAATGGCTGAGAGTGAAATGCAGCAAAGAACTAGAAATCTGCGCAAAGACTTAAGGCTTGACCTTGCGGAGACAAACTCTGACACAAGTCTTCCACCTCCTAAAAGTTCCTGGTTACTGCGTCTGTTTGAATCCAAGCTATTTGACATGTCAATTGCAATTGCATATTTGTTCAATTCCAAGGAGCCTGGAGTTCTGACATACCTTGGGAACAAACTCTTTACCTTTGATGACGAAGATGTCAACTTCTATTTGCCACAGCTTATTAACATGTACATCCACGTGGATGAAGTATCAGACGCTCTTCACAGATACTTGGTTGAGAGGTGCAAGAGGAGTTTTTCCTTTGCATTGCAGGCTTCTTGGCTGTTAGAAGCGTACTGTGCTGATGGATGGCTTCCTTCTATTGAGTATGCTAGAGGCATTAGACTGTTGCAGTTGGTGTTGGACGGATGCAGGCCAAAGTCCCCCTTAAGTCCTTCAGGTTTAGGTGGGTCTCATGCATTACCTTCGCCCGTCTCCCCAGCAACCATGGGTGCAACCTTAACCACTCCAACAAAGAAAACCCACCAGAGATCAAAATCAGATGCCACTGCAGCTATCACTGCTTCCACCCGCCTGATGCAATCAAATGAGTACGAGTCCCCAACTGGAGACCTGAGGTATGGCCATGCATTTGACAGCCGCTGCACCAAACACTCCCCTGTGATATCTCCTAATGCATCAAGTCCTGCGCTTACTGAACTAGTTCGAACACCTGATTGTGGCTGCCAGACTCCAAGGCTCGTAGCTCAAAGAGAGTTCATGAGTGCACTCATTGCTGTGGGCAAGAGGCTCACTTCCCTGCCAACAAAGGATCTCAAGACGTCCAGACTATATGCAGAACTGTCGCTGTTAAACCTGAACTTGCCAGCCAAAGTGAGCTTACCAGTGCATCCTGGGATTGGAGACCATTATGTTGTGAGAATACCACATACTGCTGCCGTGGTTCTCAACTCTAAAGATAAGgctccatatatgaTATATTTCCAACCTACATTACGGCAAACAAGGTCAGAAGAACACTTACCCACTTACTGTCGCTCGGATGTTGTCCAATTTACAGTATCGGGTGGTGACTCTGATGATGAGTGCTGGTCTACAGTGATAGAagataaatcaaaacaagatatAGTGGATgGCCCGTTTGTTGCTGCAGGAGACATAAGGCGGAGACTCTCTGAGTCTCTCAGTGCACCTCAAGCCCTGTTCAAGAGGGACCCTGAAGATCCTTCAGCTGCTGTTCTCAAGGAGCCATGGGAAGAAAAAGAAGCAAGGATTCGAGAAGCTTCACCGTATGGTCACGTGCCCAACTGGAATATCCTCTTTTATGACGTCAAAACACTACTTTACAAAATTCGTCACGCCATTTTCAGTCATGCAATTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O02810	Phosphatidylinositol 4-kinase beta OS=Bos taurus OX=9913 GN=PI4KB PE=1 SV=2
Q9UBF8	Phosphatidylinositol 4-kinase beta OS=Homo sapiens OX=9606 GN=PI4KB PE=1 SV=1
A9X1A0	Phosphatidylinositol 4-kinase beta OS=Papio anubis OX=9555 GN=PI4KB PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003685 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21245 all species →	PI4KB-PIK1_PIK	PI4KB/PIK1, accessory (PIK) domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR015433 all species →	Family	Phosphatidylinositol kinase	Interproscan
IPR042236 all species →	Homologous_superfamily	Phosphoinositide 3-kinase, accessory (PIK) domain superfamily	Interproscan
IPR049160 all species →	Domain	PI4KB/PIK1, accessory domain	Interproscan
IPR001263 all species →	Domain	Phosphoinositide 3-kinase, accessory (PIK) domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10048 all species →	PHOSPHATIDYLINOSITOL KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004430 all species →	Molecular Function	1-phosphatidylinositol 4-kinase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0046854 all species →	Biological Process	phosphatidylinositol phosphate biosynthetic process	Interproscan
GO:0048015 all species →	Biological Process	phosphatidylinositol-mediated signaling	Interproscan
GO:0052742 all species →	Molecular Function	phosphatidylinositol kinase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KAL9987779.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.