Genomic Location: chr1:28252507...28255105
NR annotation: XP_020626964.1, LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 52 homolog [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families
| CDS |
| ACROYT_G002421 |
| Transcript |
| rna-ACROYT_G002421.t0 |
| Protein |
| KAL9988024.1 |
| UniProt accession | Description |
|---|---|
| Q8N1B4 | Vacuolar protein sorting-associated protein 52 homolog OS=Homo sapiens OX=9606 GN=VPS52 PE=1 SV=1 |
| Q8C754 | Vacuolar protein sorting-associated protein 52 homolog OS=Mus musculus OX=10090 GN=Vps52 PE=1 SV=1 |
| O55166 | Vacuolar protein sorting-associated protein 52 homolog OS=Rattus norvegicus OX=10116 GN=Vps52 PE=1 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0003151 (this species only) |
KAL9988024.1. This gene does have a gene model — the search simply returned no hit.| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR007258 all species → | Family | Vps52 | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR14190 all species → | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0000938 all species → | Cellular Component | GARP complex | Interproscan |
| GO:0006896 all species → | Biological Process | Golgi to vacuole transport | Interproscan |
| GO:0007041 all species → | Biological Process | lysosomal transport | Interproscan |
| GO:0019905 all species → | Molecular Function | syntaxin binding | Interproscan |
| GO:0032456 all species → | Biological Process | endocytic recycling | Interproscan |
| GO:0042147 all species → | Biological Process | retrograde transport, endosome to Golgi | Interproscan |
KAL9988024.1.
