Detailed information of KAL9989613.1 in Oculina patagonica

Genomic Location: chr1:48344370...48347778
NR annotation: XP_020620032.1, actin-related protein 2/3 complex subunit 5-like [Orbicella faveolata]
Species Oculina patagonica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A1L108Actin-related protein 2/3 complex subunit 5-like protein OS=Rattus norvegicus OX=10116 GN=Arpc5l PE=1 SV=2
Q68FI4Actin-related protein 2/3 complex subunit 5-A OS=Xenopus laevis OX=8355 GN=arpc5-a PE=2 SV=1
Q9CPW4Actin-related protein 2/3 complex subunit 5 OS=Mus musculus OX=10090 GN=Arpc5 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008504 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04699
all species →		P16-ArcARP2/3 complex 16 kDa subunit (p16-Arc)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006789
all species →		FamilyActin-related protein 2/3 complex subunit 5Interproscan
IPR036743
all species →		Homologous_superfamilyActin-related protein 2/3 complex subunit 5 superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12644
all species →		ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0005885
all species →		Cellular ComponentArp2/3 protein complexInterproscan
GO:0015629
all species →		Cellular Componentactin cytoskeletonInterproscan
GO:0016477
all species →		Biological Processcell migrationInterproscan
GO:0034314
all species →		Biological ProcessArp2/3 complex-mediated actin nucleationInterproscan
GO:0051015
all species →		Molecular Functionactin filament bindingInterproscan
GO:0030833
all species →		Biological Processregulation of actin filament polymerizationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K05754ARPC5; actin related protein 2/3 complex, subunit 5-Cytoskeleton proteinsko04812deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP