Gene detail

Detailed information of KXJ08075.1 in Exaiptasia diaphana

Genomic Location: LJWW01000592.1:7737...12210
NR annotation: XP_020911505.1, mitoguardin 2 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6GR21	Mitoguardin 2 OS=Xenopus laevis OX=8355 GN=miga2 PE=2 SV=1
Q9W3F7	Mitoguardin OS=Drosophila melanogaster OX=7227 GN=Miga PE=1 SV=2
Q8NAN2	Mitoguardin 1 OS=Homo sapiens OX=9606 GN=MIGA1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004690 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF10265 all species →	Miga	Mitoguardin	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019392 all species →	Family	Mitoguardin	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21508 all species →	MITOGUARDIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008053 all species →	Biological Process	mitochondrial fusion	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27289	MIGA, FAM73; mitoguardin	-	Mitochondrial biogenesis	ko03029	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ08075.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

67TPM > 0

2Conditions

91.6Max TPM

38.6Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	34	38.08	91.64
whole animal · symbiotic	36	33	39.21	55.94

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	91.64
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	51.88
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	49.06
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	48.51
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	46.80
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	44.97
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	43.57
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	43.14
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	42.66
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	42.25
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	42.06
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	41.97
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	41.09
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	40.54
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	40.40
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	39.31
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	39.22
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	39.06
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	39.02
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	37.40
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	37.40
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	37.17
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	36.15
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	36.08
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	35.37
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	35.34
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	35.29
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	35.07
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	32.77
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	32.62
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	31.87
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	31.47
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	25.97
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	23.64
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	55.94
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	51.68
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	49.19
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	49.01
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	48.27
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	48.16
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	47.28
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	46.65
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	46.28
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	45.84
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	44.97
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	44.96
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	44.78
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	43.79
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	43.75
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	43.71
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	42.59
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	42.31
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	41.78
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	41.74
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	40.86
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	40.44
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	40.23
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	39.32
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	39.17
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	38.69
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	38.18
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	37.72
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	37.15
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	35.88
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	35.73
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	34.97
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	30.41
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.