Gene detail

Detailed information of KXJ09074.1 in Exaiptasia diaphana

Genomic Location: LJWW01000506.1:32626...42372
NR annotation: XP_020909973.1, aquaporin-3 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A9Y006	Aquaporin-3 OS=Sus scrofa OX=9823 GN=AQP3 PE=2 SV=1
Q08DE6	Aquaporin-3 OS=Bos taurus OX=9913 GN=AQP3 PE=2 SV=1
Q8R2N1	Aquaporin-3 OS=Mus musculus OX=10090 GN=Aqp3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001169 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00230 all species →	MIP	Major intrinsic protein	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000425 all species →	Family	Major intrinsic protein	Interproscan
IPR050363 all species →	Family	Major Intrinsic Protein/Aquaporin	Interproscan
IPR023271 all species →	Homologous_superfamily	Aquaporin-like	Interproscan
IPR022357 all species →	Conserved_site	Major intrinsic protein, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43829 all species →	AQUAPORIN OR AQUAGLYCEROPORIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015267 all species →	Molecular Function	channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0006833 all species →	Biological Process	water transport	Interproscan
GO:0015250 all species →	Molecular Function	water channel activity	Interproscan
GO:0015254 all species →	Molecular Function	glycerol channel activity	Interproscan
GO:0015793 all species →	Biological Process	glycerol transmembrane transport	Interproscan
GO:0016323 all species →	Cellular Component	basolateral plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09877	AQP9; aquaporin-9	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ09074.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

68TPM > 0

2Conditions

189.7Max TPM

81.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	33	60.60	85.57
whole animal · symbiotic	36	35	102.98	189.73

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	85.57
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	81.33
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	78.80
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	78.51
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	77.31
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	76.80
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	75.60
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	75.41
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	73.49
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	73.35
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	72.71
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	71.74
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	70.94
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	70.10
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	67.93
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	67.63
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	67.38
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	66.95
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	66.83
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	66.33
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	65.69
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	64.90
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	64.61
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	63.47
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	62.70
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	61.46
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	60.92
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	51.37
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	48.79
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	48.13
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	43.28
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	43.22
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	38.50
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	189.73
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	142.32
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	136.27
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	129.88
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	126.29
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	125.12
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	123.61
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	122.75
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	122.14
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	120.21
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	118.25
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	113.91
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	113.73
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	112.81
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	111.67
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	109.64
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	107.99
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	107.69
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	107.54
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	107.25
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	103.98
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	102.73
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	96.46
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	95.09
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	94.91
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	91.92
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	88.25
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	86.79
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	85.74
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	82.22
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	82.08
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	74.96
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	67.90
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	65.61
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	39.96
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.