Gene detail

Detailed information of KXJ09863.1 in Exaiptasia diaphana

Genomic Location: LJWW01000448.1:83773...90242
NR annotation: XP_020908314.1, 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35083	1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Mus musculus OX=10090 GN=Agpat1 PE=1 SV=1
Q95JH0	1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Ovis aries OX=9940 GN=AGPAT1 PE=2 SV=1
Q99943	1-acyl-sn-glycerol-3-phosphate acyltransferase alpha OS=Homo sapiens OX=9606 GN=AGPAT1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005816 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01553 all species →	Acyltransferase	Acyltransferase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002123 all species →	Domain	Phospholipid/glycerol acyltransferase	Interproscan
IPR004552 all species →	Domain	1-acyl-sn-glycerol-3-phosphate acyltransferase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10434 all species →	1-ACYL-SN-GLYCEROL-3-PHOSPHATE ACYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016746 all species →	Molecular Function	acyltransferase activity	Interproscan
GO:0003841 all species →	Molecular Function	1-acylglycerol-3-phosphate O-acyltransferase activity	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan
GO:0006654 all species →	Biological Process	phosphatidic acid biosynthetic process	Interproscan
GO:0008654 all species →	Biological Process	phospholipid biosynthetic process	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13509	AGPAT1_2; lysophosphatidate acyltransferase	EC:2.3.1.51	Lipid biosynthesis proteins	ko01004	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ09863.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

66TPM > 0

2Conditions

115.9Max TPM

45.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	33	46.79	76.79
whole animal · symbiotic	36	33	43.92	115.91

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	76.79
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	73.51
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	61.09
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	59.82
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	58.75
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	57.05
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	56.63
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	56.22
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	55.21
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	55.05
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	55.00
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	54.30
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	53.68
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	53.51
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	52.90
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	52.82
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	51.54
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	50.65
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	49.26
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	48.91
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	47.78
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	47.52
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	46.53
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	45.93
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	45.26
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	44.98
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	44.45
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	43.71
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	43.65
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	40.94
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	36.32
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	34.19
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	30.33
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	115.91
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	60.81
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	58.00
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	57.77
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	57.43
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	56.24
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	54.68
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	54.67
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	52.09
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	51.47
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	51.19
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	50.68
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	50.07
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	49.94
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	49.35
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	48.61
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	48.33
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	47.98
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	44.49
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	44.24
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	41.39
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	40.43
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	40.21
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	39.15
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	38.89
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	38.01
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	37.22
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	36.45
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	35.43
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	33.99
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	32.84
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	31.71
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	31.36
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.