Gene detail

Detailed information of KXJ11751.1 in Exaiptasia diaphana

Genomic Location: LJWW01000351.1:37175...53496
NR annotation: KXJ11751.1, Werner syndrome ATP-dependent helicase [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ11751.1

ATGATGAGTAGCTTGGAAAATGCAATCGAAAAATTGTCTTCCGCTGCAAATCGCTTGAACCAAGTAGTGCACTACCTCGAGAAAGAAGTAGAGAGCCATATACCAGATGAACTTATTGATGCAATTGAAGAAAACGTGAATCGATTGTACGGCAAAGTTGTCCAGCCTTGTCAAGAAGACGTGACCTCAGATGGCGATGACAATACTTCTACCGTCTCGCCACCATCTCCAAGTTGCTTAGATCAAGTGATAAATGATAGCGATGATGATACCGTAGATCCTATTGATGATGATCATAATGATGCTGATAATGATGCTGATATTATGGATCCAATAGATAATGAGAATGATGATGATCTATTTGATGATGTTCTATCCAAGGTTGATTTTGAAGAACTTTGCAACAAAAGTATAAGCGAGTATGAAGAAAAATATGTGAACAAAAACAAACATGATGTTTTATCTGAAGAAAAAGCTGTCAACTCATCTTCAAAAGAGAACCACAACATCATGACAGATAATSAAGATATTCCCATTGCTGAGCCCGATGCTAGGTATAAGAAGGTTTTGAAAGACTATTTTGGACATTCTAAATTCAGACCAATGCAGTGGAAGATTATTGATCTGGTCCTCAACCAAAAGAGAGATGTTTGTGTTGTCATGGCAACAGGATATGGCAAAAGTCTGTGCTATCAGTTCCCACCATTATTTAACCATAGTAGTGCTGTCGTGATATCACCCTTGATTTCACTCATGCAGGATCAAGTCAGAAAGCTAGAAGTCAATAATATTTCTGCTTGCTACCTTGGAAGTGCACAGACTGACAGTGCCAATATAAGAGCTGGAATCTTCAGGGGTGAATACAGGGTCATCTATTTGACACCTGAGTATGTCAGTGCAAATGTAGAATTCCTGGCAAGGCTAAAGAGAGAAGTTGGTCTCAGTCTTGTTGCTGTTGATGAGGCCCATTGTGTGTCGCAGTGGGGACATGACTTTAGGTCATCTTACAGACAACTTGGMTGCATTAGGAATAAGTTACCCAATGTTCCGATAGTAGCATTGACAGCAACAGCTACTGAGATGGTTAGAAAGGACATCTGCTCATCACTTAATCTGAATCGACCAGCAATGGTCTGTACTGGCTTTGACAGGCCTAATCTATATTTTGAGGTACAAACAAAGTCATCAAGTATTATTGAAGATATACGGCCACTTCTTACCGAGACCAAACAATCAAACAAGGTATCATTCTCATTTGGYGGCCCTACCATCATCTACTGCCCTACAAAGAAGTCTACTGAAACTGTCCAGGAAGCAGTAGCAGCATGTGGTGTCTCTTGTCTTGTTTATCATGCTGGATTAGCATTATCGGCAAGAAAGAAAGCTCAAACAAAGTTCACTAATGATGAAATTGAGTGTGTYGTAGCTACAGTTGCCTTCGGTATGGGAATTGATAAACCTGATGTACGAAGAGTTATTCATTATGGAGCTCCTAAGGATATTGAGTCATATTACCAAGAGATAGGAAGGGCTGGAAGAGATGGGGAAGAAAGCACATGCCATGTATTTTATAAATCAGGAGACTTTGCTGTATCAAGACACCTTATAAACGAAATTGGATCAGAAAAGCTAAGGAGCCATAAATTAGAGATGCTCAACAAACTAGACCAATTTCTAAACACATCGGAGTGTAGACGAAGGAAAGTCTTGGCATACTTTGAGGATCCTAGCAAACTTCAGAATATYGGAGGAACATGGAAATGCTGTGATAATTGCAGAAACATCTTAAGGAACCCTTCCTCTAAATCAAWTAAGAAGGATTACACTGAAGAAGCCAAGCAACTTTGCTCTGCCGTGAAGGCAACAGGAAATGGCAAATATGGAGTTACAATGGTGGTATTACTACTTAGAGGATCTACCTCACAGAAGGTTCCACTTCGATTCACAAAGATGAGGGAATATGGAACTGGAAGGCAACTATTGACTGAGAATTACCTTGAAGAGAAAGCAAATGTGGGWGGATATGGAAGCCTTATTGCTTTGTCAGCTAAAGGGGACAAATGGCTGACAGATGCAAAGACATCTAACGCTGCYAAGATTGAGTTAGTGCCATCAAAGGTTATTGTTATTGTTGTTGTTGCTGTTGTTGTTGCTGCTGTTGTTGTTGTTGCTGTTGCTGCTGCTGCTGTTGTTGCTACTGCTGTTGTTGTTGTTGCTGCTGTTGTTGCTACTGCTGTTGTTGTTGTTGCTGCTTGTGTTGTTGTTGCTGTTGCTGTTGTTGTTGTTGCTGTTGCTGTTGTTGTTGTTGCTGCTGTTGTTGCTGTTGTTGCTGTTGTTTTTGCTGTTTTTGTTCCTATTGTTGTTGCTGCTGCTGTTGTTGTTGTTGTTGCTGTTGTTGCTGCTGATGTTCTTGTTGCTGTTGCTGCAGTTGTTGTTGTTGTTCCTGTTGTTGTTGCTGCTGCTGTTGTTGTTGTTGCTGCTGCTGTTGTTGTTGTTGTTGTTGCTGCTGCTGTTGTTGTTGTTGTTGCTGTTGTTGCTGTTGTTGCTGCTGATGTTCTTGTTGCTGCTGCTGCTGCTGTTTTTGTTGTTGGTGTTGTTGTTGTTGATGTTGTTGTTGCTGCTGTTGTTATTGCTGTTGTTGCTAGTTGCTGCTGCTGTTGCTTTTGTTATTGGTTACCTGTGCTCTCCACAAGGGCCCCAGTAAAAATCCTTTGCCACGAGGTACCTGATAGTAAAGAAAGGCTGCTTCGTATTGATGGGATATCAGAAAGACAGACGGAGAGAGTTGGTGACCAGCTTTTAGCATGTGTGAAAGAATTCTGTTCCCAGAATAACATTGCTACAAACATGTTTGCAGATGAGACGGATGGTTTTAGGGCCTCGGCAAGCCAGGAACCTGTAGCCACACTGCGCAGGACACTTAGTGGCACGGTGTCAACWTCATACACCTTGTTCCATGAAAAGAACATGTCAATTAGAGAAATTTCAAAATCAAGAAATCTGGTAGAAGGAACTATATATGGTCATTTAGCTGATGCCCTAGTTGCTGGGTACCCTGTGGACTACAAGAGGGCCGGAGTTACAGAGGAAATACAGAATCAAGTTCTTCATGTCATTAGATCTCCTCCCATCAACTCAGATGTTAGCAAACTATCTCTGATAAAAGAAAGACTCCCACCTCACATTTCTTTCGGGCACATCAGAATAGTGATAGCAATAGTTGAAAGTCAAGCAAAGCCTTCGATAGTGCCTCAACAGTCCAGGAATGTGKTCACTGCAACCAACACAAACACTATAACACCATCTCAAGGAATAAAAAGAAAGGTTCCTGAATGGTTATCAACGACACAATTCAAACCAGGAAACAAAGCAAAGAAGAAAAACCCATTCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14191	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Homo sapiens OX=9606 GN=WRN PE=1 SV=2
O09053	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Mus musculus OX=10090 GN=Wrn PE=1 SV=3
O93530	Bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN OS=Xenopus laevis OX=8355 GN=wrn PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000285 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271 all species →	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270 all species →	DEAD	DEAD/DEAH box helicase	Domain	Interproscan
PF16124 all species →	RecQ_Zn_bind	RecQ zinc-binding	Domain	Interproscan
PF14493 all species →	HTH_40	Helix-turn-helix domain	Domain	Interproscan
PF09382 all species →	RQC	RQC domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044876 all species →	Homologous_superfamily	HRDC domain superfamily	Interproscan
IPR001650 all species →	Domain	Helicase, C-terminal domain-like	Interproscan
IPR004589 all species →	Family	DNA helicase, ATP-dependent, RecQ type	Interproscan
IPR010997 all species →	Homologous_superfamily	HRDC-like superfamily	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR036390 all species →	Homologous_superfamily	Winged helix DNA-binding domain superfamily	Interproscan
IPR011545 all species →	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR018982 all species →	Domain	RQC domain	Interproscan
IPR032284 all species →	Domain	ATP-dependent DNA helicase RecQ, zinc-binding domain	Interproscan
IPR014001 all species →	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR029491 all species →	Domain	Helicase Helix-turn-helix domain	Interproscan
IPR036388 all species →	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13710 all species →	DNA HELICASE RECQ FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0006310 all species →	Biological Process	DNA recombination	Interproscan
GO:0000166 all species →	Molecular Function	nucleotide binding	Interproscan
GO:0044237 all species →	Biological Process	obsolete cellular metabolic process	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0006260 all species →	Biological Process	DNA replication	Interproscan
GO:0006281 all species →	Biological Process	DNA repair	Interproscan
GO:0043138 all species →	Molecular Function	3'-5' DNA helicase activity	Interproscan
GO:0000723 all species →	Biological Process	telomere maintenance	Interproscan
GO:0000724 all species →	Biological Process	double-strand break repair via homologous recombination	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005654 all species →	Cellular Component	nucleoplasm	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006268 all species →	Biological Process	DNA unwinding involved in DNA replication	Interproscan
GO:0009378 all species →	Molecular Function	four-way junction helicase activity	Interproscan
GO:0032508 all species →	Biological Process	DNA duplex unwinding	Interproscan
GO:0044806 all species →	Biological Process	G-quadruplex DNA unwinding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ11751.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.