Gene detail

Detailed information of KXJ12667.1 in Exaiptasia diaphana

Genomic Location: LJWW01000313.1:138638...149164
NR annotation: XP_020903339.1, armadillo repeat-containing protein 3 isoform X1 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ12667.1

ATGGGGAAGAAAAAGACGAAAGAGCCTGAAGCTCCTCCAAAAGACGAGTTTGACCCATTGGAACTCGTGAGCAAGAAGCCCCACACGGTCGTGTTAATGCTTGATTCCCCTGAGGAAAATGTCCAGCAACTATCCTGTGAAGCCTTGTACAAGTTCTCTGAAAAATGTGATGAAAATCGTCAGCTCTTATTGACGCTTGGTGCACTGGACCCCCTTCTAAGACTTGTTGCGTCAGAAGACAAAGTTGTACGTCGAAATGCAGCCATGTGTCTGGGCACACTGACACACAATGTTGCTGTTCATCGAGAACTAAGGAAGATGTCTTGTGTCACGCCATTGGTCACACTACTTGGTCCTGAGGAGGATGTCCTTTGTCATGAGTTTGCAACCTTAGCACTTGCCAACATGTCAGCGGATTTCTCAAGCAAAATTGAGATATTTGAACAAGGGGGACTGGAACCTTTAATAAGGCTGTTAGCATCACCTGACTGTGATGTCCAGAAAAATGCAGTGGAGTCTATTTGTCATCTTGTTCAAGACCATCATAGTAGATCAGCCATCAGAGAGCTAAATGGGATTTCACCTTTACTCAACCTGTTCAGCTCTGAGTATGCTATAATACAACAGCTTGCCTTGGAGAGTCTGGCTCATATTACAGTGGATGCTGAGAACCGAACAGCTCTTCGTGATCTTGAAGGCCTTGAAAAACTGGTTGACTTCGTGGGGAATAAGGAATTTGACGACCTACATGTTCATGCTCTGAAGGTTCTCTCCAACTGTTTACAAGATGTGGAAAGCATGCAGGTCATCCAGACATCAGGTGCTTTGCAGAAACTTTTAGCMTTTGTTGGTGAATCTCAAATCCCTGAAGTTCAACAACATGCGGCCAAGGCGATTGCATTAGCTGCAAAAAATAGTGAAAACAGAAAAATCCTTCATGAGCAGGAGTGCGAGAAGACTCTGATATCATTACTGACAACTGATAACCCAGGCTTACAGATGTCTCTGGCAACAGCATTAGCAGTGATATCTGAAAACCTTAGCAGCAGAGAAACCATTGGGAAGCTTGATGGTGTACAACCTCTTATCAACTTATTGAGTAACGAGTCACCTGAGGTGCGGGAAGCAGCAACTCTTGCTTTGGCAAATATCACAACGTCAAACCAGAATAACTGCAGTTTGGTTGTTGAGAAAGGTGGTATAGATCCTTTGATTGGKTTGCTCATTGACAGCAAGATWCCTGTACAATCAAATGCTGCTGTCTGCTTGACAAATCTCTCTGCTGATGAATATTGGAGGATGGAAGCTCAACAACGGGGTATTATACCTGCTCTTGTTCAAGCTCTGCAGTCTAATGCTGCAGTGGTACAGAGTAAAGTAGCCATGGCAGTTGCTGCTTTTGTAGGCGATGCAGAGTCAAGAAACGAATTTCGAGCAGAGAGTGGAATACCAAGGCTTATTGAACTATTGCGTTCCAATAACGATGAAGTGCGGCGAAGTGCATCATGGGCTATCCTGCAATGTGCTAATGATCTRCCGACAGCAACAGAAATATGTCGACTGGGGGGTCTTGAAGTCCTGGGCGAGATATCAGTCTCTTCCACTCGGCAGTCAGGGTTCGCCTCAGTTGCCATGGAAACTCTCCTTGATAGTAACTTACCCGCCAAGTACGCGTTGACAGGCAGCCTGACGTCAAACAACATAATACAAGACGAGTTCTACGATGCAGGGCCGATGAAACCCGAAGTCCGATTTTTAACACTCGAGGAGATGTTTAAACAACCAGTCAACGAGCACCGACCAATCCTTCTGGTTAACTCTAAAGATCGTGAAAGAGCGCCATCTACACCTTTACCGACCATTGTCCAACCAGAGAAAGTGATTCAGCCTGAAAAGATAGTYGGCGGAAAAAGCAAAACAAATCTGAAAAGTAAAAGTCGTACCATRCGCGTCGAAAAAGAAGAACAAAAATCTAAAGAAGAGGAGGTACCACCAGAAACCTCCGCCTCGCCCCCAGCCCCTCCTCCTTGGTATCCTCCCTGGGATCCAATCTTCCACGGTTACATTGAGGAAGTCAAAGCTACCATCCAACCCTTACTCAGCTCAAGTGATCAGGTGGTTGCGCTGGCAAGGTTCGTCAGCGATAAGATGGGAGGYCCTGTAGAACGTGACGCATTGTCGTCCTTTAGTTACGAGCTGCCYATCAGTCAACTCAAGGTCGAACTTCAGTCTAATATCGTCCCTATTGGTCGGATTACAACGGGTATTTTCTACCACAGAGCGTTGCTTTTTAAAGCTCTTGCTGATCGTATTGCTGTAGGGTGTTCTCTTGTCCGTGGAGACTACAATAGAGCCTGGAACGAGGTCATGCTCTGCGAGGATACTAAGGATGGAGGTCCGGTTTTGCCTCCCAAGATGTACATCGTCGACTTAATGCACGAACCAGGGCGATTAATGCTGGGTGGGTCCCCAGAAAGCATTGCCTATCAGCGACTTTGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2AU72	Armadillo repeat-containing protein 3 OS=Mus musculus OX=10090 GN=Armc3 PE=1 SV=1
Q5W041	Armadillo repeat-containing protein 3 OS=Homo sapiens OX=9606 GN=ARMC3 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005361 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14381 all species →	EDR1	Ethylene-responsive protein kinase Le-CTR1	Family	Interproscan
PF12717 all species →	Cnd1	non-SMC mitotic condensation complex subunit 1	Repeat	Interproscan
PF00514 all species →	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR000225 all species →	Repeat	Armadillo	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR032682 all species →	Domain	Condensin complex subunit 1, C-terminal	Interproscan
IPR052441 all species →	Family	Armadillo Repeat & Ser/Thr Protein Kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46618 all species →	ARMADILLO REPEAT-CONTAINING PROTEIN 3	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24124	ARMC3; armadillo repeat-containing protein 3	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.