Gene detail

Detailed information of KXJ12717.1 in Exaiptasia diaphana

Genomic Location: LJWW01000311.1:238466...261183
NR annotation: XP_020903264.1, dynamin-1-like protein isoform X2 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ12717.1

ATGGAGCAGCTTATTCCAGTTATCAATAAGCTACAAGATGTTTTTAACACTGTAGGTTCAGAAACCATCCAACTGCCGCAAATTGTCGTTATTGGAACTCAGAGTAGTGGCAAGAGTTCTGTGTTGGAGAACATCGTTGGAAGAGATTTTCTACCAAGAGGTTCTGGAGTTGTAACAAGAAGGCCCTTAGTGCTCCAACTTGTTCATGTGCCATCAAGAAAGCCATCAAAGAAAACACCTATTAAYTCTAAAAGTCATAAAGAAAAGATGACTCCAGATGAAGAAAAAGCTGAAAATGGTCAGGAAAAATATTATAGTGGCGATGAAGCAGGAGAGGATGAAGTTGACGAAGAAGATGAYGAGGATGATAATGATGAACCAGAAGAGTGGGGAAAGTTCTTGCATTTGAAAGAAAAAAAATTTATAGATTTTGATGATATACGAGATGAAATTGAGAGGGAAACTGAGCGAGTAACAGGAAGCAACAAGGGCATTTCTAATAAACCTATCAATTTGAAGATCTATTCCCCTAAAGTTGTAAACCTGACGTTGGTTGATTTACCAGGGGTTACTAAGGTACCAGTTGGCGATCAACCTCATGACATAGAGCAACAGATTAGGCTTCTTATTTTACAATATATCAGGAACCCTAACTCTATAATCCTTGCTGTCTCACCTGCAAACATTGACCTGGCAACATCAGAGGCTTTGAAAATTGCTAAAGAGGTTGACCCTGAAGGTCATAGGACTCTAGCAGTTTGCACTAAGTTGGATTTAATGGATCATGGTACCGATGCTCTTGAGATACTATATGGAAGAGTTATTCCTGTCAARCTTGGAATAATAGGTGTCGTCAACCGTAGTCAATTAGACATCAATAATAAAAAGTCAATACAAAAAGCCTTAAAAGATGAAGGTTCCTTCTTTGCCAAACATTATCCAACACTAGCTTCAAGAAATGGTACACCTTACTTAGCTAGGACACTGAATAAGCTACTGATGCACCATATACGAAATTGTCTGCCAGAGTTAAAGTCTCGTGTGAATAGCATGATTTCCCAGTACAATCATTTATTACAAAGCTATGGGGAACCAGTCAAGGACAAGGGTACATGTCTTTTACAACTAATCACAAGATTTGCGGCATCGTATTGTTCAATAATTGAAGGAACAGCCCGCGACATTGAGACCTCTGAACTATGTGGTGGTGCTAGAATATGTTACATTTTTCATGATATCTTTGGACGAACATTGACCAACACCGATGCTATGGAAGGACTATCAACGAGAGACATACTCACAGCTATTAGAAATGCTACGGGTCCGAGACCAGCCTTGTTTGTACCTGAAATATCCTTTGAGTTACTGGTCAAACGGCAAATTAGACGACTTGAAGAACCAAGTTTACGCTGTGTGGAACTCGTTCACGAAGAAATGCAAAGGATTATACAACACTCTTTTCAACAGGTCATGGAAATTAAGAGATTCCCCAAGCTACATGACAGAATTGTAGAAGTTATTATCGAGTTGCTACAAAGAAGACTTGATCCTTGCAATGACATGGTGGAACATTTGGTATCTATTGAGCTGGCCTACATCAACACYAACCATCCAGACTTCACKGACGGAGCTGCTTTAGTTTCATCTGTTGTACACAATCAAGAAATGGACCGTAGGCGAAGACTCAAAGCAGCTCAAGCCAGCTTAACTAATGGACCATTAGAGGGTGTAAGATCRCAGTCTTCTACACCAGTTGGTAGTCCAGTCCACGCCCCAAACCGTGACCACAAAGAGGAGGAAAATAGTACTAATCCTAGTAACCCAGCAGACARCACCGGTGGTTTTATGTCCTGGATGCCCGGCATAAGAAGCTCTAAGGCTGCCGATCAGTCTGTCAGTGAAGTGGCCAAACAAACAACTGTTTCTACGGATTTTCCCAGCTCTCTTCGTCAAAGAGGATTGACTGAAAGAGAGCAAATGGACTCTGACATCATYAGGAAATTGATAGTTTCATATTTCAATATCGTAAGGAAATCTATTCAAGACAGTGTACCAAAAGCAATTATGTGCTTTCTTGTCAATTACGTTCAAGAGAAAATCCAAAGTGAATTGGTTGAAAAACTTTATAAGAGTGAAGAATTCAACGTGCTTTTAGAAGAATCTGAGCACATGCATGTGAAGAGAAGAGAGGCGTCTGAAATGCTTAAGGCGCTTCAGCGAGCTGGACAGATAATAAGTGAGATACGAGATACGCATGTGTGGTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O00429	Dynamin-1-like protein OS=Homo sapiens OX=9606 GN=DNM1L PE=1 SV=2
Q8K1M6	Dynamin-1-like protein OS=Mus musculus OX=10090 GN=Dnm1l PE=1 SV=3
Q2KIA5	Dynamin-1-like protein OS=Bos taurus OX=9913 GN=DNM1L PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001381 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01031 all species →	Dynamin_M	Dynamin central region	Family	Interproscan
PF00350 all species →	Dynamin_N	Dynamin family	Domain	Interproscan
PF02212 all species →	GED	Dynamin GTPase effector domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR003130 all species →	Domain	Dynamin GTPase effector	Interproscan
IPR000375 all species →	Domain	Dynamin stalk domain	Interproscan
IPR030381 all species →	Domain	Dynamin-type guanine nucleotide-binding (G) domain	Interproscan
IPR045063 all species →	Domain	Dynamin, N-terminal	Interproscan
IPR022812 all species →	Family	Dynamin	Interproscan
IPR001401 all species →	Domain	Dynamin, GTPase domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR020850 all species →	Domain	GTPase effector domain	Interproscan
IPR019762 all species →	Conserved_site	Dynamin, GTPase region, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11566 all species →	DYNAMIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0000266 all species →	Biological Process	mitochondrial fission	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17065	DNM1L; dynamin 1-like protein	EC:3.6.5.5	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.