Gene detail

Detailed information of KXJ16058.1 in Exaiptasia diaphana

Genomic Location: LJWW01000206.1:158157...165856
NR annotation: KXJ16058.1, Histone-arginine methyltransferase CARMER [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ16058.1

ATGACTACCGAAAAATATGACAACACTTTCGATCCTAAAGTCTACTTTGACACTTATTACGATGACCCAAGCAAAGATGAGTACTATCTTATCAGGTTGACTGACTTTTTTACTCGAGTTGTAAAAGACAAAGCCACTAGTATGCTGGAATACGGTGCGGGCCCAACTATCTCAAGGTTCATCACTGCCTCTAAGCATCTTAAAAGTGTCATTGCTGCTGAATACGTTAARGAAAATCGACAGGCCATGGAAGACTGGATCAATCAAGACCCWAAAGCATTCAACTGGAGACCGACTTTTGAATACGTGGTACAGAAGCTGGAAGGCATGACACCAGATGAAGTTGAGAAACGTGAAGCAGARGTMCGAGAGAAGATCAAAGCAGTTGTACATTGCGATATTAAAGCAGAAAATCATCTAGAAATTCCAAGTGAAATCTCTKCCAAGTACGGCCCGCCATTTGATGTTGTTGCGTCAAGTCTAACTCTCGAGGGAGTTGTTGATACGTTCCAAGAGTACAAAGATCAAGTGTCATACCTGACTAACCTTCTGCAAACCGGTGGCCATCTACTCTTGCATGGTGTTTTGGAGCAAAGTTTTTACACTGTTGGAAACGATTTTTCGCCGAATTTTCGGGTTACTGGCGATACAAATCATTGTCAAGTTGGTCGTCTTCGATACCTTGTGGATCTACCGCAGCACTGTTGTAGTGCCGTCATAACATTTCAACGACATGAGGAGGTGACAGAATTTAAGACAATGCTATCATCAGCAACTGAAAAGCTGCAAAACAAGTCATTGTTTTGTGAAAGAACAGAGGAAGCATCAGCTACACAGTACTTCCAGTTTTATGGTTATCTTTCCCAACAACAGAATATGATGCAGGACTACACAAGGACGTCAACATATCAGAAAGCTATGCTTCAGAATCATGTTGATTTTGAAGATAAGGTTGTAATTGATGTTGGTGCTGGTTCAGGAATCCTGTCATTCTTTGCTGTCCAGGCAGGTGCAAAGAAAGTATATGCAATAGAAGCTAGTTCGATGGCCAAGCATGCTGAGCTGCTAGTCAAGAAAAACAATCTTGAAGGGAAAATAATTTTAGTTCCAGGAAAAGTTGAAGAGGTTCATATACCAGAAGAGGTCGATATAATTATCTCTGAACCAATGGGGTATATGTTGTATAATGAACGTATGTTGGAGAGTTATTTACATGCAAAGAAATGGCTCAAACCAGGAGGAAAAATGTTCCCAACCCAAGGTGATCTACATATTGCTCCTTTCTCTGATGATGCATTGTATATTGAACACTTTTCAAAAGCAAATTTCTGGCATCAAAAATCGTTTTATGGTGTTGACTTATCAAGTTTGAGAAAAGCTGCTCTAAAAGAGTACTTCAGACARCCTGTAGTGGACACGTTTGATGTGCGTATTCTGATGGCAAAACCAATCACACACACTGTTGACTTCTTGACATCAGAAGAGGATGACCTTCACAGGATTAACATCCCCGTCAAGTTTTCTCTGTTAAACAGTGGTTCTCTGCATGGACTGGCTTTCTGGTTTGATGTGGTGTTTCAGGGAAGTCAGCAACCGGTATGGCTGTCAACAGCTCCACATGAACCTTTAACTCACTGGTATCAGGTGCGCTGCTTGTTGGAAACTCCTATCTTTGTTAAAGCTGGTCAGACAATAACAGGGACTGTACTCCTTATATCTAATACAAGACAAAGCTATGATGTAGAGTTAGAYCTTGGGCTTGAAGGTACTACCATTCGTTCCAAGAATACAGTGGATCTGAAGAACCCGTACTTTAGGTACACTGGCTCAACTCCACAACCACCAGCTGGATATAACAACGAATCACCAACTGATGTGTACTGGTCCCTAACCAGCAATGGAGACACACACAATGCTACTGAAAACTTGTCTCAAGATGGAGGATGTGGCCAAGGTGTTATCCTCACAGACAATGTTGTTGGTATGCAGTCAAACTCATTTTATAACAATACAGGTATAACTGGATATGTTGGAGGAGGGCACAATCAGTACTGGTCTTCAGGCAATGCTATTAACATCTCAAGTCTGCCAACCATACAAAACTATACATCCAGCTTTGGTGCCATGAGTTATGCCAACACAGGTTCCAGCTACATAGCCAGCAGTCAACCCGCAATGACTTACAGTCATACAACGTCGCGGAACCTACTAAGTGGACAACATGGCCGACCTTATCAATCAGGGTATTCAAGAAATAGCAGCACATCAAGATGA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B4HJC0	Histone-arginine methyltransferase CARMER OS=Drosophila sechellia OX=7238 GN=Art4 PE=3 SV=1
B4PVH6	Histone-arginine methyltransferase CARMER OS=Drosophila yakuba OX=7245 GN=Art4 PE=3 SV=1
Q9VH48	Probable histone-arginine methyltransferase CARMER OS=Drosophila melanogaster OX=7227 GN=Art4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004745 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01234 all species →	NNMT_PNMT_TEMT	NNMT/PNMT/TEMT family	Family	Interproscan
PF06325 all species →	PrmA	Ribosomal protein L11 methyltransferase (PrmA)	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR025799 all species →	Family	Protein arginine N-methyltransferase	Interproscan
IPR000940 all species →	Family	Methyltransferase, NNMT/PNMT/TEMT	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11006 all species →	PROTEIN ARGININE N-METHYLTRANSFERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016274 all species →	Molecular Function	protein-arginine N-methyltransferase activity	Interproscan
GO:0018216 all species →	Biological Process	peptidyl-arginine methylation	Interproscan
GO:0008168 all species →	Molecular Function	methyltransferase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K05931	CARM1, PRMT4; type I protein arginine methyltransferase	EC:2.1.1.319	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.