Gene detail

Detailed information of KXJ16145.1 in Exaiptasia diaphana

Genomic Location: LJWW01000204.1:12664...20586
NR annotation: XP_020897339.1, proliferation marker protein Ki-67 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ16145.1

ATGAGTGCTTTATTAGGCCGTATTATAGTAATCAAAAGAAATGGCTCCGATGGGGCACATTTTCCGCTAAAAAAACAAGAGTGTTTGTTTGGAAGAAACAACGAGTGTGATATCCGTATCCAATTGCCAAACGTCTCGAAGGAACAAAAAAAAATTTCAGTTGACTCCGAAAAGAAGGTGTGGTTAGAGAACCTTAGTASTTGCCAGGATACTCTACTTAATGGTACTGCAGTTACTGGTCTAAAGGCAGTCTCACATTTGGATGTGTTTACTATAAGTGACAGGTCRTTTAGATTTGAGTTTCCTACGCCAAAGAAAACTACACCAAAGAAATCTCCCAAGAGTCCAAAAAGAAGATCAAGTGAGGGATCTCTAGAAAGAAAGTCTTTGACACCAAGGGGTAGTCCCCGCATCCCTGTTCCCCCTCCAGACACCTTAAAAGAGAACATCCACCTTTTACGAAGGCAGTCTGTTCCACTTCAAGAAGTAGATRAAAGTTTGCTTTCTCCTTTGACGACCAAGTCTCCATTGTCRACATCTAGTGAAATGAACAGCATCAACAGTGAAATGAAGACTACCCCAACTGGAAAATCTCCTGGAAGAAGAAAGTCCATGTCAAGAAAGGCAAAGCGAGTTTCCTTTGGATCAATACTGAGTCCAGAACTTTTTGACAAGACCTTACCAGCTGCTACTCCTGTGAAGAGAGGTGCTACACCAAGAAGAATTTCCTCTGAATGCAAACCAATTTTGTCTGATATAAAGAAGAGACGATCTGTCGTAGTGTCACCATCTACCGATGCAATCTCAGAGGAAGATGAGATGGTAGAAAATCAAGRAAATAGTGATGTCAACAATGACAACTCAGAAAGTCTTCTTTGTATGTTACCTGATCCAGGAAATCAAAAAGATTCAGCTATGATTGTTGAACAGCTTCCCTCTCAAGTTCCAGACTTACCTGCTCAAGATGAAGAAAGTCCCAAAGCTGCACCATCTGTGACTCCAAGGCGCTCAAGTAGAAGGTTATCCACTCTAATGATGGAACAGATTAAAGTCTTGATAGATGAAAATAAAGTCAGTGTTGATACCACATCTGAAGATGAAGAATGCAGTGAAGACAAGAAAAGAAGACTTGCTACACCAGTGAGAAAGGCCATTGAAGCTGGTTTCCAACTTAAGGCCACCAAGAAAAAGCTTGCTACTCCACTACGTAAAGCCATTCAGTCGAAACCTGTCTTGAAAGAAACCAAAAAGAAAATTGCTACTCCACTCAGAAAGGAAATTCAACAAGGCATTGAACTTAAAGCTACTAAAAAGAAACTTGCTACTCCACTTCGTAAAGAAATTCAAGCAAAGCCAACCCTGAGGGAGACCAAAAAGAAATTGGCAACACCTATACGACAGGAGATCCAAAATGGTGTTGAACTTAAAGCTACCAAAAAGAAACTTGCTACACCACTGCGTAAAGAGATACAATCCAAGCCATCTTTGAGAGAAACCAAAAGGAAGCTAGCTACACCTCTACGTCAAGAAATTCAATCCAAKCCAGTTTTGAGAGAGACCAAGAAAAAGCTAAATACACCTYTGAGGAAAGAGATCCAAAGTAAACCAAACCTTCGCCAAACCAAGAAGGTAATGCCTACGGAGCTACAGGATRAAATCAARMTTGGTGTAAAGCTGCATCWAACCAAGAAGATTATGGCATATGACTTGCAAATCGACATTATCAAAGGCAAGAAATTGAGAGCAACAAAGAAAAAGATGGCAACGCCATTGAGGGAGGAGATCCAGAAAGGTGTTTCACTAAGAAAGACTAAGAAGAGCATGCCAACTCCTCTAAAGAAAGAAATTTCTAAAGGGGTAGAGTTGAACAAAACCAAGAAATCATTGCCTGCTGCAGTACAAGATGAAATCAAACACGGAAAAACTCTTAGACAAACYAAGAAAAAGATGCAGACACCACTAAAGCAGGAAATTGAGAAAGGCACAAAACTCAAAGAGACAAAGAAGAAGATGGTTACACCACTGAAAAGAGAAATCCAAGCAGGAACTGAATTGAAGAAAAACACAAGAAAGATTGAAACTCCAAAGCAGAATGAAAGCCAGCCTAAGCGAAGAAAATCRAGCCAAGGTGGCAGTTCTTCTGTAAAGAAACTAAAGACACCTATGCGTCAAGAAATTGAATCAGGTTTCAAATTGCGTCAGAGACGTCTAGCAACGCCACTCAGGAGAGACATCCACAGACGTCGTTCACTGAAACCTGTAAGAAGAAAGTCTACCAAGCTTGCCTCTGCTGAGGTGCAACCAAGGAGAAAACCCACATATGCTGAAATCCTAAAGAGACCCAAGAAAGTTGCAGTTAGAAGGCTTTCAAGTAAGCRAGTTCCTGTCACAAAGTTTGGTCCAACAGCTCTGCCTGGACAAGCTGCAAGGCTTGCAACAACAACAGCTGTGAAGAAACCTGAAGTCAAGATACAAACAGGTCAAGCAGACACCAAGAMAACCCCAATTGTCAAGGAACAYGAGATCAAAAAYCTTGAAGGCATTGCTGAAATGTTTGTCACTCCTGTCACCACTCACACMAGAGTTACCAGAAGTGCCAGGAAATCTGGAAATTGGCTTGATACTATTGCCAAAACCTTGCCAGAGCAGACCAGGGTAGAAGTCCATGAACAGGACCTTGAAGGCGTTCCTGAAATGTTCGCAACTCCAGAGGAAGTCCCCAGAAAGAGGAGATCAATGAGACAAAGTAGTGGTAACTGGCTTGATGYCATCGCTAAGACGCTTCCTGATGTRAACACCAAAGAAATTGTCGAGGAAGACCTGGATGGGTTGAAAGAATTGTTTGCAACTCCCGAAGAGGCTGCGAAAAAGATAAAAACTGCGAGGAAAAAGTCTGGTAACTGGCTTGATGTCATTGCTAAGACCCTTGGCCAAGGAAAGTCCAAACGATCATCTGTAGACCTTGGAGGCCTTCAAGAACTATTCTCTACACCATCAGCAGCAAAAATGACCAGCCCAGTTGAAGAGAGAAACACTCCATYYCTGCGWGGTAAAGACTCGCAAATTTCAATCCACGTTGAATCGGCAAAGGTCACCAAAACACCAAGCCTACGTCAAGTGGCSATGGTGCGTAACAGTTGTAACATGAGTGGAACACCTAGAATGATTGAAGCAATTAAAGCATCAAAAACACCATCTTTGAGGTCAAGCAGGCGATCCGACGAAACATTTAATCTTGCCTTGATGTCAAGTCCTGTAAGGCAAGTACAAACTCCTTCGCTTCGCTCTAAAGACTCCCAGTTTCTTACAGTAGATGCATTGCAAGCTTCCAAAACACCTTCCCTTCGCAATTCCAAAGAGCCAGTTGAAATGTTTCAAGCCATTGAGCCTTCRAARACACCATCCCTTCGTAATGCYAAGGAGCCACTTGAAGTCTTCCAAGCCATTGAAATTTCAAAGACTCCATCACTGAGAACAGGCGATAACAAGACAGTCCGCACCAAAAAGAACAAAGAACGCAAGAGCATTAATTACACTGGTGTCAAACAACTCATGAAGACGCCAAAGATGAAAAATAACGACGATGAACCCGAGGATAATTTCGTGTCTTCATGGTTTTCTACACCAAACCTTCCATYCAAGTCTCCAAAGACTAGAAATGCYGTTGCGCAGGTTAGTGGAGACTTTGAGCTCGACATGATAAACATCGAGTCTAAAGCAACGAAATCCAGCAAGTCACCAAGGATAMGAAATGCCATTGCTGACATCGAAGAGAACTTCGTTCCTGGTCTCTTTGCTTCTCCTGTCCATGTTGAACGTTCCGCGAAGAASRCRAMRTYTTCCTCYAAGAAGGCGGCACCTAARCCTGTAGATGAAGTAAATGATAGCGCTGRGAACGAAGTCATCGMAGTCGAAGCCAACAAAATAGAAGTTGTTARTGCAGTGGAAGAAGTTGTCGCAGAAGAAAAGCCCCAAAGACGCACTACAAGATCAAAGAGAGCTGCACCAGAACTAGTTAAAGAACCAGCCAAGAAGAGAGCAAAGCGCGAAACCGCTCCAGTTGAACCAAAAAAGAACGGACGCAAAACTAGAAGTTCTGCTAAAACCACTAAGTCTTCAGCAAAGAAAGACTCAGTTGGTGTAGTTGAAACACCAAAACCAATGTCCTTCAAACGTACAGTACTRGATCCCATTCCAGAGCTACCGACTCCTTTAACAACACCTCGTGTAACAAGAACAAGAACAGTGTCGGTAATGTCACCAACTCTAGAAGCTATCCAGGAAAAACAGCAAGAGGCCATCGCCCAGGAAGAGCCAGTGACAAAGCAAACTCGCGGTAAAGGTAAAGMTCAACCTATAGAGAAGAAAGAAGAGCCCGCTACTCGTTCTTCGCGAAGAARAATRAAACCAGAGATTGTTGATAAGTCAGAAGAAGTCTTGGAATYAGTTCCTCGATCCACTCGTGGAACGCGCAGTCGAAAGAYAGTCGAAGAACCAGCCGAGGAGAAAGTCGAGAAACCTCTGCGTGCTACCAGAAAAACTAAAGGCAAAGCTCATGTTGTCGAAAATGCAAGTACAGACAACAAAACGTCTACTGAAGAAGCTGTAGAACCAACGAAAACTCGTGCGACACGCGGTAAAAAGCAAGTTGAAGAGCCTGTCAWSGAAGTRGAGATCACTCGTCGTGATACTAGAAAAACTAAAAGCAAAGCTGTTGTCGAAAAGTCCGCTGAACAAGTTGAAGAACCAACCACAACTCGTGCAAAAAGAACACGTGGAAAGAAGACAGTTGAACAACCTGCCGAAGAGAAAGACGAGTCGAGCTCACAGGAATCTGTTACCAAGGACACGAGAAGGACAAGAGCAACCAATGTTAATGAAAAAGAAATTGAAGTCGAGGAAGTAAAGCCTGAGAAAGTAACTCGTTCAAGAAACACTCGAAGTAAAAAAGTCGCCGTCGAGAAAGACGAAGAAGTAGACGTAATGCCACCAAAGAGATCAACTCGTGGAAAGAAGACCAAGACTGAGGAAGTTTTGCCCGAGGTAGAAGTTCAACCGAAGACTCGTTCAACACGCGGTGGCAAGAAACAAYCRAAACCTGTTATTGCTGAAGAAATCGTCATCCMRGAGACTGAACYATTAAAGAAACAAGGGACTAATAACAGCCGCTCAACACGCAGTCGCAAAGAACCMCAGAAACAARCAGAAGAAGTKGTTGAAAGGCGGTCTGGAAGGAAGCGTGTTGCTGAAGAACAACCARCAACGACACGTAGTGGCAAGAAGGCAAAAACCGACGTCGAGGTTGACGACAAGAATGAGKTTGAAGAAGTGAAACCCAAACGCAGCACACGCGCRACTAAAGCACCAAAAGAAGACATYAAACAACCAACAAGAGGAAGTAAACGTCAAGCTTCCAAGGTCGCTGTACCAACCCCCAAGAAGCAGCGTATGTCTACAAGATCAAGAAARTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P46013	Proliferation marker protein Ki-67 OS=Homo sapiens OX=9606 GN=MKI67 PE=1 SV=2
E9PVX6	Proliferation marker protein Ki-67 OS=Mus musculus OX=10090 GN=Mki67 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006601 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15276 all species →	PP1_bind	Protein phosphatase 1 binding	Family	Interproscan
PF16697 all species →	Yop-YscD_cpl	Inner membrane component of T3SS, cytoplasmic domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000253 all species →	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR029334 all species →	Domain	Protein phosphatase 1 binding domain	Interproscan
IPR008984 all species →	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR032030 all species →	Domain	YscD, cytoplasmic domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21603 all species →	ANTIGEN KI-67-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0005694 all species →	Cellular Component	chromosome	Interproscan
GO:0007088 all species →	Biological Process	regulation of mitotic nuclear division	Interproscan
GO:0051983 all species →	Biological Process	regulation of chromosome segregation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K17582	MKI67; antigen KI-67	-	Protein phosphatases and associated proteins	ko01009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.