Gene detail

Detailed information of KXJ16428.1 in Exaiptasia diaphana

Genomic Location: LJWW01000197.1:336441...355816
NR annotation: KXJ16428.1, Transposable element Tcb1 transposase [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ16428.1

ATGGCACGGACAGCACTAGGATTTAACCCGTCTAAGTCATTATGCATAGCCTTGTCAGGCTTGGTTCTAGGYGTGATTTTACTGATCGCTGGAGGAGTAATCTTTGGGACTTTCCAGCAACGATGYGAGCCGTCTCCTACCGCTACCACGCAAATCGAGAAACGTGGACGCTCGTGTGAGCTATCCGAAGAAGCAAAGCGTAGTGGATTTGGAACTTTTTTGGACAAAGTTAAGGCAATGTACTATGAATTACATCCTTTCAAAATCCATTATAATTCCGACTTGTGGTATAAGGATGACTTTTCAGATCAAATCAAGGCTATTTACATTTCTTATGACCCCTCACCCGAAGCCATCAAGAGACGAACTGACGCATCGTTTAGGCTTTTAAAAGAAATGAAGTCTTTGGACATTTCACTTGAAAAACTTAAGGGAAGAGAAAGRAAGGCTTACTCTAAAGCTATGTTATACCTCCAGCAAGTATTTGGACAGCCATTCGAAGTGAATTACTATGCGGGGGATTGGATGCTTGGCCSGGATTCATTTTGCTACAGTACAATATGCTACATGGGTTATGACTTGTATAATTCAATGTTATATCACGTCCCTAAGAACCTTAAAGATGTAGAACTTGTCAAATCTAAGCTTATGTCCCATCAGAAGGCGCTCATCCAGTATGTGGAGAATTTGAAAATGGGCGTGAGGAAGGGGATGGTCAGGAACATTGAGTCGTGTAAAGCTGGACTGGACGCCTTTAAGATTGAGCACCCGCAGATTTCTCTCAATAGTGCAAAAGGAGTATTAAAAGAGTGGTACACGACATTTCTCCTGTCTCCAAAATTCTACATCAACATAACCAGTGGTATGAACGAGGAGTGGACGAAAGCGCACGGTATGAATGTCAGTGAATCAATCAAGAATTATCTCTTAGAGTATTTTGGAAAACCGCTGGCAGATGTATTGAGGTATCTTGAAGACGATCATGWGCGTCACTGCGTACCGAGTAACGTTTCTAGCGGCTTAGCAACCCTTCCATTAAAATACGTTTATCTTGATGGAAAAGCAAATATGTCGTGGCCAACTGACCCAACCCTACCCCTGACTGACAAAGTTTTAAATGGAACAGAATCTTACGCRAAGATTATGCCATATTTTACGACCAATGAGATGACACCAGATGAGGTTTACAAGTTAGGATGGGAAATGCTGAACAAACTGTATCCAAAGGCTGTTCAGGTCGCAAGGGAAGTTACTAATATTTACAACGACAACGATACTGCTGTTGCGGAATTTCGAAAAAKTCTGAACTCATCGCAGAGCTACTTCAACGAGGAACCTTTTCCTAAGAACGAAAGTGACAAATTGGCCAACCGTAGATGTARTACTGTTGAAGGTGCTAAGAAATACTGCCCTTCACGATGGCGGGCAATGCAAACATGGTTTAGTGAAGCTAGAAAGCAACGATGYGAGCCGTCTCCTACCGCTACCACGCAAATCGAGAAACGTGGACGCTCGTGTGAGCTATCCGAAGAAGCAAAGCGTAGTGGATTTGGAACTTTTTTGGACAAAGTTAAGGCAATGTACTATGAATTACATCCTTTCAAAATCCATTATAATTCCGACTTGTGGTATAAGGATGACTTTTCAGATCAAATCAAGGCTATTTACATTTCTTATGACCCCTCACCCGAAGCCATCAAGAGACGAACTGACGCATCGTTTAGGCTTTTAAAAGAAATGAAGTCTTTGGACATTTCACTTGAAAAACTTAAGGGAAGAGAAAGAAAGGCTTACTCTAAAGCTATGTTATACCTCCAGCAAGTATTTGGACAGCCATTCGAAGTGAATTACTATGCGGGGGATTGGATGCTTGGCCSGGATTCATTTTGCTACAGTACAATATGCTACATGGGTTATGACTTGTATAATTCAATGTTATATCACGTCCCTAAGAACCTTAAAGATGTAGAACTTGTCAAATCTAAGCTTATGTCCCATCAGAAGGCGCTCATCCAGTATGTGGAGAATTTGAAAATGGGCGTGAGGAAGGGGATGGTCAGGAACATTGAGTCGTGTAAAGCTGGACTGGACGCCTTTAAGATTGAGCACCCGCAGATTTCTCTCAATAGTGCAAAAGGAGTATTAAAAGAGTGGTACACGACATTTCTCCTGTCTCCAAAATTCTACATCAACATAACCAGTGGTATGAACGAGGAGTGGACGAAAGCGCACGGTATGAATGTCAGTGAATCAATCAAGAATTATCTCTTAGAGTATTTTGGAAAACCGCTGGCAGATGTATTGAGAATTTTGGACAATTACATCATATTTACATCAAATTTACAACCTTTAAAGCGCGCGATTTTTTCCAGTGTTTTAACATTGAATTYGTCTCAGGTCCAGGGACGCGTTGAACATTTCAAGGTTACTTGCACCGATTCTCTGGGCTGGATAAATCAAAACACGTACACTGCTTTYAGTGAAGGGTGGGCCTTGTATGCTGAGAATCCACTCATTGCTGAAGACACCGATACGTACAACGATGAACCTATGCAACGATACGGCATGCTGCAATTGCAGGGGATGACTAGAGCCGAGGCCCTCAAACTTCACAGTGATAAAGCCTGGGACGACACAGATGTGGCCGAAAAAGAAGTCACCCGTTAYCAGAGCGTCGCGGGTCAAGCTACCGGGTATATGATTGGTCAATTGGTTATTAAGAAAACCAGAGAGAAAGCAACTAGAGAATTGGGAAGCGACTTCAACTTAAAGGATTTCCATTACCAAGTACTATCCCAGGGTGCTTTGCCGCTTGGGTACTTGTCCGATCATATAAATCGATACATCATGTGCAAGAGGACCCCTTCAARATCAGGTTGCGAAGAAATACTTGTGCCCACAAAAACGGCAAACGTTATGACGTCATCGTACAACAAAGAGACGTCATACTTAAGAGGAGTGACGTTAGAAAGATCACAACCTTCTTTCTTGAAAATAGCTGAAATATGCAACTGTTCGCCGTCAACGGTACATAAGATAGCCAAAACACCTTTAACAAGTATTGAAGCAAACAAAAAAGGAAGGAAACCTTCGAAGGGACGACCAAGAAAGCTCAGTACTCGTCAAGGGAGAACTATTATACGTGCATTGTATAATCTCAGAAAAACGGAAGGGAATTTCACGGTAAAGCGGATAGTGAGAGAAGCTGGTCTATCCGAAGGCGAAGTGTCAGTGCGCACTGTCAGCCGCTACTTGAACAGAAAAGGATACTATTCTTTGGTAGCTCGAAAGAAAGGTCTTATGACCGATCGTGATAGAAAGCTGAGGATAGCCTTTGCCAGACGCATGAAAAAAGACTTTCCTGAAAACGTTTGGACAAACCACGTTGCCTTCTACTTAGATGGTGTGTCTTTCGTACATAAAACTAGACCTCTTGACCAAGCAATAGCTCCAAGAGGAAAGATTTGGCGTAAAAAGGCTGAAGGACTGGAACCCGGATGTACYGCAAAAGGSCACAAAAGTGGATCGGGAGGGAAGCAAGTAAAGCTCTTAGTGGCCCTATCACATAACAAAGGCGTACTTTTGTGCGAAAAATGCAAGCACATGGATGGCGCTTTCTASGCAAGTTTTATAGAGAAACATTTCGAACAGGCATTTATGAGAGCAAACAAGGGACAGCGTCGCCTTTGGATACAAGACGGAGACCCATCCCAAAATAGCGCTCAAGCACGTCAGGCTATGGCTAAAGTTCAAGCCGAACTCCTCAAAATCCCACCAAGATCACCTGAATTAAATCCTTGTGAAAATTTTTTTAAACTTGTTTTAGACCAATTGAGACACGATGCAATAACTAAGAAGATTGAATGA

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000182 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05960 all species →	DUF885	Bacterial protein of unknown function (DUF885)	Family	Interproscan
PF01498 all species →	HTH_Tnp_Tc3_2	Transposase	Family	Interproscan
PF13358 all species →	DDE_3	DDE superfamily endonuclease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010281 all species →	Family	Protein of unknown function DUF885	Interproscan
IPR002492 all species →	Domain	Transposase, Tc1-like	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR038717 all species →	Domain	Tc1-like transposase, DDE domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR33361 all species →	GLR0591 PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0006313 all species →	Biological Process	DNA transposition	Interproscan
GO:0015074 all species →	Biological Process	DNA integration	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ16428.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.