Gene detail

Detailed information of KXJ16699.1 in Exaiptasia diaphana

Genomic Location: LJWW01000191.1:293976...299585
NR annotation: XP_020896285.1, HAUS augmin-like complex subunit 3 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q68CZ6	HAUS augmin-like complex subunit 3 OS=Homo sapiens OX=9606 GN=HAUS3 PE=1 SV=1
Q8QZX2	HAUS augmin-like complex subunit 3 OS=Mus musculus OX=10090 GN=Haus3 PE=1 SV=1
Q6DCY9	HAUS augmin-like complex subunit 3 OS=Xenopus laevis OX=8355 GN=haus3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005303 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14932 all species →	HAUS-augmin3	HAUS augmin-like complex subunit 3	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026206 all species →	Family	HAUS augmin-like complex subunit 3	Interproscan
IPR032733 all species →	Domain	HAUS augmin-like complex subunit 3, N-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19378 all species →	GOLGIN- RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005813 all species →	Cellular Component	centrosome	Interproscan
GO:0007098 all species →	Biological Process	centrosome cycle	Interproscan
GO:0051225 all species →	Biological Process	spindle assembly	Interproscan
GO:0070652 all species →	Cellular Component	HAUS complex	Interproscan
GO:0072686 all species →	Cellular Component	mitotic spindle	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16586	HAUS3, AUG3; HAUS augmin-like complex subunit 3	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ16699.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

57TPM > 0

2Conditions

37.0Max TPM

3.3Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	26	2.10	5.12
whole animal · symbiotic	36	31	4.46	36.96

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	5.12
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	4.51
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	4.35
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	4.04
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.94
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.65
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.52
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.51
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.44
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.32
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.26
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.25
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	3.22
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.96
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.57
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.56
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.47
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.39
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.37
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.24
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	2.21
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	1.94
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	1.75
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	1.26
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	1.07
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.72
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	36.96
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	6.43
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	6.22
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.73
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.37
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.37
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.18
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.13
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.70
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.64
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.42
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.38
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.28
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.27
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.03
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.99
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.97
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.95
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.85
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.80
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.73
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.63
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.56
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.51
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.48
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	3.22
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	2.93
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	2.72
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	2.67
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	2.63
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	1.66
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.