Gene detail

Detailed information of KXJ18478.1 in Exaiptasia diaphana

Genomic Location: LJWW01000150.1:203206...206900
NR annotation: KXJ18478.1, RNA pseudouridylate synthase domain-containing protein 2 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8IZ73	Pseudouridylate synthase RPUSD2 OS=Homo sapiens OX=9606 GN=RPUSD2 PE=1 SV=2
Q149F1	Pseudouridylate synthase RPUSD2 OS=Mus musculus OX=10090 GN=Rpusd2 PE=1 SV=2
Q09709	Pseudouridylate synthase C18B11.02c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC18B11.02c PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003100 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00849 all species →	PseudoU_synth_2	RNA pseudouridylate synthase	Family	Interproscan
PF21410 all species →	MAP6	Microtubule-associated protein 6	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006224 all species →	Conserved_site	Pseudouridine synthase, RluA-like, conserved site	Interproscan
IPR006225 all species →	Family	Pseudouridine synthase, RluC/RluD	Interproscan
IPR020103 all species →	Homologous_superfamily	Pseudouridine synthase, catalytic domain superfamily	Interproscan
IPR050188 all species →	Family	RluA Pseudouridine Synthase	Interproscan
IPR006145 all species →	Domain	Pseudouridine synthase, RsuA/RluA-like	Interproscan
IPR007882 all species →	Family	Microtubule-associated protein 6	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21600 all species →	MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0001522 all species →	Biological Process	pseudouridine synthesis	Interproscan
GO:0003723 all species →	Molecular Function	RNA binding	Interproscan
GO:0009451 all species →	Biological Process	RNA modification	Interproscan
GO:0009982 all species →	Molecular Function	pseudouridine synthase activity	Interproscan
GO:0000455 all species →	Biological Process	enzyme-directed rRNA pseudouridine synthesis	Interproscan
GO:0000226 all species →	Biological Process	microtubule cytoskeleton organization	Interproscan
GO:0005516 all species →	Molecular Function	calmodulin binding	Interproscan
GO:0005874 all species →	Cellular Component	microtubule	Interproscan
GO:0008017 all species →	Molecular Function	microtubule binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ18478.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.