Gene detail

Detailed information of KXJ19478.1 in Exaiptasia diaphana

Genomic Location: LJWW01000130.1:296936...309355
NR annotation: KXJ19478.1, tRNA3(Ser)-specific nuclease WapA [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ19478.1

ATGACTTTTGCATTTCATATATGGAGAGAAAAACATGCTTTATATCATGATTTTATGATTTTTCTAGCGATGCTGCGCATGCACAGCTTGGCGATTCTGCTGGCTTTTGTCCAGTACAGCCATAACTATGAAGTGGGGAATATGTTAACGGAGTTTAAAGTTGAGCTAGGCCAAGCAAAGTATGTTGTACCTGTGGCTACACCCAAAGGATTCCCAACTCATTTATTTGAAGTCCAACTTCAGTACACTAGTGGCGGAGGGAATGGTCCTCTTGGGGTCGGATGGAGCATAGGGGGATTGACCCAAATCGAAAGGTGTGCTAAGACCCCAGCTCAAGACGGACTTCGAAGTGGTGTAAATTACGATAATAAAGACCGATTTTGCTATGAAGGCTCTAGGCTTGTCGTGACTTCTGGTTCTTACGGTGTGGATGGGTCGACATATGGCACAGAGTTAGATTCCTACATGAGAGCTTATGCCCTTGGTTCACAAGGAGCAGGACCTCAGAGATTTCACATTAAGACCAAAGGAAACCAGAAAATGACATTTGGATCCCACGCTAATTCCCGCGTTTTTGCTCATGGTGTTCAAAGTATCCACGCGTGGAAACTCGATTCAATCAGCGACTATTCTAACAACGTAATCAAGGTAAAGTACATGGACAACACGAATGGTTTATTGGTATCACAAATCTCCTATAATAACATGCTGATTTCCTTTGAGTACGAAGCTCGCAGTGATGTCTCTACGAGTTATCTCAATGGCGGTGTCTTCCATACGCAAAACAAACGACTGAAATCTGTCAAAACACTTGTATCAGGTCAACTCCACCGTGAAATCAAAATAACGTATCAAACAGCTAAGACTTCACAACAGAGCATCATATCGACTGTCCAGTTGTGTTCCAGGGGTGGAAAATGTTACAAACCGGAGACAATGACGTATCAAGGTACTGTCGATGTGGAAAGAGCCAGCAGCCCAAGATACTGGATTCATGAGTTTGGATATAATCAAGGATGGCGTGTAGGTACCCACTCTCGTCAGGTAGTCGATATGAATGATGATGGTTTGGCAGATATAGTGGGATTTTCCAATGGAGGTGTTGTGGTGGCTCTGAACAGCGGAGCCCGATCATTCAAGCGACATAGAACATGGGTGCATTCATTTGGCTCCAGTTCGGGTGGGTGGGGTCGTCAACATCCTCGACATGTTGTAGACGTCAATGGCGACCATCTTCCAGACATAGTTGGATTTGCCAATGATGGAGTCTATGTTGCTCTTAAYACYGGAAAGGARTCTTTTACTTCTCCAAGAAACTGGTTGTATCAATTTGGTTACAACCATGGCTGGAGAGTAGAGAACCATCCAAGATTCGTGAAAGATATGAATGGCGATGGCTTAGCCGACATTGTTGGCTTTGCTAATGGCGGTGTTTATGTTGCCCTTGGAACTGGTTCTCGTTTTCAAACAAGTCGAAGATGGCTGGCAGCGTTTGGATATTCTGCCGGCGGATGGCGCGTTGCAGATCACCCAAGGTTTCTGGARGACGTCACAGGRGATGGTCTTCCAGATGTTGTAGGAATGGCTAATGAYGGTATATAYGTTGGAGTCAATACAGGAACGTCCTTTAAATCAGCATCCCGGTGGGGAAGTCAATTTGGACACAACGCAGGAGGATGGAGAACCAACCAACACCCTAGATTCGTTGTGGATGTCAACGGAGATGGCTTGCCTGATGTTATTGGATTCTCCTGTTGTGGTGTAGAGGTTTCTCTTTGCACAGGAAAGAGTTTTCTGCCTTCAAGGACATGGTTTCGTGGATTTTCTTATAACAATGGCTGGAGGGTAGAGCACCACCCACGATTTGTGCAGGATGTAAATGGAGACGGACTAGCTGATGTCGTTGGTATTGCAAATAGTGGAGTTTACGTTGCAATAAATTCTGGGTTGTCCTCATTTTCTTACAAAAGGCATTGGACGGGAGCTTTYGGTAAGGACAGCGGTGGTTGGGTAAACAAATACCATCCTCGTTATCTGGCCGATGTAACAGGAGACGGAGTTGTGGATATCATTGGTTTTGCTAATTCAGGAGCATACATCTCTACAAATGATAATAAACAAACCCTGTTAACATCCTTTGCCGACAGCTATAAGAACACGCACAAGATTACTTACTCCTCATTAGCTGAAAAAACGATTTATACTCGAGGAAACACTATGCCCTATCCAAATCCAAAAGTTAATGTTGCACAGACTGTGGTCAAACAATATACACAGAATAATGGCATTGGAGGGTTGAATACTACCTCATTTACCTACAGTGGCATGCGTGTCAATTTAAAAGGTCGTRGTGGATTGGGATTCAGTGAGGTTACTGAGAAAAGACATGAAAACGCCGAAACAACAACCACATCGTATCATCAGAACTTTCCATTAACATCGATGACAAAATCCGTTACAAAGAAAGTTGGTGGCGTTGCAGTCCTTCAAAGTACTAAATCGTACAGTTCAAGGTCTAGGAGTAGTGGACAAAAGCAGGTTTTGCTACAGAAGGACGTWGTAAATCACTATGAACTCAACGGTAACCTTGTAAGAACGGAACAGCTAGTCATCGATGGCGTAGATGATTATGGAAACATAAAAGCGATGAATAAAATCACAAGTGGAAACGGCAAAACCTTTGAACARAAAACACTAAATAATTATACTAATAACCCTCACACATGGTACATTGGAGAGTTAGACTCGGTTGCAGTGTCTTATCACAGTKCAGGCGCCACAACCATAGTGAGGAGATCGATATTCTATTACGACCGAACCACAAGGAATCTTAAATACGAACTCAGAGAACCAAACCATCACCTCGGAATAAAAACGTCATATGTTTACGATTCCAAAGGCAACGTTGTTGAAAAAGCTGAAACTCCAATTTTCCCGAGGTCAGCTTCTCTTACCCCTATTCCTCGACGGGTATTTATGACTTACGACACGGAGGGTCTTCATCTCCTGTCCGTAAAGAACGATTTTGGACACACTGAATCTTACAAGTACGACGTATTTGGCAATGTACTCTCATTCATAGGAGCTAATGGCCTTAAGACAACTTACAAGTACGACGYCTTTGACAGACGCATCCAAGAAATTCGTCCAGACGGCGTTACTACCAAAATGGAGCTATATTTCAGTGCACATCACACTTCTCTTAAGAGAGCTGTTTATATAGAGAAGACAACCAGAAGTGGAGATCAAGACACTCTCAAGATCTACGACTGCTTAGACAGACCTATTCGTATACAATCAAAGGGATTTAAAGGGCAAGATGTCTACCAGGATATCGATTACGATCCGTTTGGTCAAGTGCGAAGACAAAGTTTACCATACTATTCTAAGGGCCAATCACCTTCCTGGATAGTATTCAAGTACGATAAGATTGGTCGTGAGATTCTTGAGGAACGACCATTAGATGGTCCAGGCACTGCTCGAAGAGTGAAAGTATATAATGGACTTGAATCAGTCACCACAGATGCTAATGGCAACAGGAAAAAGATGGAGAGGGATGTATTAGGAAGAATTATCAAAGTGACGGATGCTCTTGGTGGAAAGGCGACATATCAGTACGATTCGGTTGGGAACTTGATMAAAACAACTGATCCTGGGGGTCACGTGACTTCTATAGCATATGATCAACTTGGTAACAAGGTATCCATAGATGATCCTGATATGGGCCTCTGGAAGTACTCGTATGACGCACATGGTCAAAAGATATGGCAGAAAGACGCTGTAGGCAACGAAATATTCTATACTTACGACAGACTGGGCCGCATGATTGCTCAGCGTGCCCCTGAAGGGAGAACAAAGTGGATTTACGACCAAAGCGCTCACGGAAAAGGAAAACTCTCTAAAACAGAATCTCCAAATGGTCACGTCAAGGAGTATACATACGATGATAAAGGCAGAGAGAGTACTATCAGACAGCGAATAGATGGACAAATTTTTGATGTCCACTCGAGTTACAACAATCTTGGACAACTAACGCAGCAAACACTACCAAAGAACAAGAAGGTTAATTACTGCTACGATGACCAAGGTTTTCTAACTGAGGTATCTAGAGCGCCATGTGGCCAGGGATCATCGACATCAGTCTACTGGAGAGCGCTAGCCTATGATTCATTTGGACACATAGCAAAGGARCAGTATGGCAACTCACTATTGACTGACTACACTTATGATGGCAGTAACCACATCAAATCCATTAAAACGTTAGACTTCTCCAGGAGAATGAAGCGACACTGGGAGTACACATTCGATGCTTCTGGAAATATGCTTGAGAGAAGAGATTTTTCGCATAAGTGGAACACTAAAGAGACATTTTTCTACGACGCTCTGGACAGAATTACCAAGGCTAACATAAGAAGCATGAATCTCAACAAGGAAGCAGCATTCAGTGAAGATTGGGAGTACGATAGTTCCGGTAACCTTCGCAGGTACAGCGGATTTGGAGGTCTCCATCACGAATACAGCAGCTCACAGCCCCATGCAGTCATCCGTGCTGGTCCCAATACCTACTCATAYGATTCGAACGGTAACATGGTAAAAAAGAACAATCAACACGTGACATGGACCTCATTTAATAAGCCAAGAACGATAGAGAGAAAGACTAGAGATACCGTCAAGTTTGAATATGATGCCAGTCTAAATCGTTTTAAAAAATCCAGTCCTGAAGAGACAAGCATATACATTGGAAAAGTATACGAGAAAATCACGGATGGCAAGAAAACCTCTCATAAGTACTTTATATACGCTCTTGGAAGGCTAGTTGCTATAGATACGAAGGTMGAGTCTGAACTATCATCATCGGCTATTATAAGGTACATCCATGGAGACCATCTTGATTCCGTTGATACGGTGACTGACGAAAGAGGCAATATTCTCGAATCGCTTAGGTATAATGCTTATGGACAGAGACGCTCAGAGCACTGGGCAAGCTTTGAAGGATGCACTAGCCACGCACAACGTGGTTCTGCTACTACTGGTACTAAACGTGGATTCACAGGGCACGAGCATCTAGAGGAAGTAGATCTTATTCACATGAACGGACGTATATATGATCCTGTTGTTGGGCGATTCCTCAGTCCTGACCCTCATGTTCAAGACCCCTACAACACTCAGAACTTGAACCGTTACAGCTACACTTTGAACAACCCTCTTAAGCATACGGATCCATCTGGTTACTTCTTTAAGAARATCGGTCGTATCTTCAAGAAAATATGGAAACCATTAGTTACAGTCGTGGCTGTCGTAGCATCAGTGGTGACACTAGGAGCAGCTGCTCCAATTGCTGCTGGAGTAGTTGCATCGGTAGGGTTAACAGGAGTGACTGGAACTATCGCAGCAGGAGCATTAGCAGGGGCAGCAGCTGGGTTTGTTGGAGGTGCGATTGCTGGAGGATCTCTTAAAGCAGGCTTGAAAGGTGCGTTAGGTGGAGCCATTACCGGTGGAATTGGCGCAGGTATCGGAGCGCATTTCGGTAGCACWTGGAACCTTGAACGTGTCGCAGCCCAAGCTATAGGTGGAGGAACRGCGAGYGAACTCACTGGCGGGAGATTTAAAGACGGGTTTCTGCTTGCTGGAATAACAGCATCTGCGCAGTACCTTTACAACACTATGGTCAACTATAAACCCACATGGCAGTCAGGGGGTCCAGCACAACCAAAGACTCAAACTCAGATGCCCATAAAGGGAGCAAATAACATTGGTATCCAACGWGATCAGACTATTGACCCGAGGAGTTGGCTTTACGAAGGAGGAAGAATCAGCAGATTTTTGAACAAAGTACCCGGAGTTAACGCTGTGGCAGGTTTGCATGAYGTGTTCCAAGTCAGGCTGGATGGCGCTATTATCCCGGGGGCCCGAGATATTTTGAATGTACCGGATGCGCCATCAGACCTTTCAAACAAAGTCGCAATTGTCACTGGAGGAAATTCTGGTATTGGTTTTGAAACTGTTAAAGGTCTCTGCAAAACAGGAATGACCGTAATTATGGCTTGCAGGTCTGAAGAAAAGGCAAACAAAGCAATTGAATTATTAAAAGAGGAGCAACCAGATTCAAAAGATAATTATACTAATGAAACATTGTCATCTATTATATTCTGTAACAGATCTGGGTCACCAGAAAGTTATTCAAGAATTGTTACTGTTTCTTCATCTGCTGGAAAATTTGGAACCATTAACTTTGAAGATTTACAGAGCAAGTAA

Protein

KXJ19478.1

MTFAFHIWREKHALYHDFMIFLAMLRMHSLAILLAFVQYSHNYEVGNMLTEFKVELGQAKYVVPVATPKGFPTHLFEVQLQYTSGGGNGPLGVGWSIGGLTQIERCAKTPAQDGLRSGVNYDNKDRFCYEGSRLVVTSGSYGVDGSTYGTELDSYMRAYALGSQGAGPQRFHIKTKGNQKMTFGSHANSRVFAHGVQSIHAWKLDSISDYSNNVIKVKYMDNTNGLLVSQISYNNMLISFEYEARSDVSTSYLNGGVFHTQNKRLKSVKTLVSGQLHREIKITYQTAKTSQQSIISTVQLCSRGGKCYKPETMTYQGTVDVERASSPRYWIHEFGYNQGWRVGTHSRQVVDMNDDGLADIVGFSNGGVVVALNSGARSFKRHRTWVHSFGSSSGGWGRQHPRHVVDVNGDHLPDIVGFANDGVYVALNTGKESFTSPRNWLYQFGYNHGWRVENHPRFVKDMNGDGLADIVGFANGGVYVALGTGSRFQTSRRWLAAFGYSAGGWRVADHPRFLEDVTGDGLPDVVGMANDGIYVGVNTGTSFKSASRWGSQFGHNAGGWRTNQHPRFVVDVNGDGLPDVIGFSCCGVEVSLCTGKSFLPSRTWFRGFSYNNGWRVEHHPRFVQDVNGDGLADVVGIANSGVYVAINSGLSSFSYKRHWTGAFGKDSGGWVNKYHPRYLADVTGDGVVDIIGFANSGAYISTNDNKQTLLTSFADSYKNTHKITYSSLAEKTIYTRGNTMPYPNPKVNVAQTVVKQYTQNNGIGGLNTTSFTYSGMRVNLKGRXGLGFSEVTEKRHENAETTTTSYHQNFPLTSMTKSVTKKVGGVAVLQSTKSYSSRSRSSGQKQVLLQKDVVNHYELNGNLVRTEQLVIDGVDDYGNIKAMNKITSGNGKTFEQKTLNNYTNNPHTWYIGELDSVAVSYHSXGATTIVRRSIFYYDRTTRNLKYELREPNHHLGIKTSYVYDSKGNVVEKAETPIFPRSASLTPIPRRVFMTYDTEGLHLLSVKNDFGHTESYKYDVFGNVLSFIGANGLKTTYKYDXFDRRIQEIRPDGVTTKMELYFSAHHTSLKRAVYIEKTTRSGDQDTLKIYDCLDRPIRIQSKGFKGQDVYQDIDYDPFGQVRRQSLPYYSKGQSPSWIVFKYDKIGREILEERPLDGPGTARRVKVYNGLESVTTDANGNRKKMERDVLGRIIKVTDALGGKATYQYDSVGNLIKTTDPGGHVTSIAYDQLGNKVSIDDPDMGLWKYSYDAHGQKIWQKDAVGNEIFYTYDRLGRMIAQRAPEGRTKWIYDQSAHGKGKLSKTESPNGHVKEYTYDDKGRESTIRQRIDGQIFDVHSSYNNLGQLTQQTLPKNKKVNYCYDDQGFLTEVSRAPCGQGSSTSVYWRALAYDSFGHIAKEQYGNSLLTDYTYDGSNHIKSIKTLDFSRRMKRHWEYTFDASGNMLERRDFSHKWNTKETFFYDALDRITKANIRSMNLNKEAAFSEDWEYDSSGNLRRYSGFGGLHHEYSSSQPHAVIRAGPNTYSYDSNGNMVKKNNQHVTWTSFNKPRTIERKTRDTVKFEYDASLNRFKKSSPEETSIYIGKVYEKITDGKKTSHKYFIYALGRLVAIDTKVESELSSSAIIRYIHGDHLDSVDTVTDERGNILESLRYNAYGQRRSEHWASFEGCTSHAQRGSATTGTKRGFTGHEHLEEVDLIHMNGRIYDPVVGRFLSPDPHVQDPYNTQNLNRYSYTLNNPLKHTDPSGYFFKKIGRIFKKIWKPLVTVVAVVASVVTLGAAAPIAAGVVASVGLTGVTGTIAAGALAGAAAGFVGGAIAGGSLKAGLKGALGGAITGGIGAGIGAHFGSTWNLERVAAQAIGGGTASELTGGRFKDGFLLAGITASAQYLYNTMVNYKPTWQSGGPAQPKTQTQMPIKGANNIGIQRDQTIDPRSWLYEGGRISRFLNKVPGVNAVAGLHDVFQVRLDGAIIPGARDILNVPDAPSDLSNKVAIVTGGNSGIGFETVKGLCKTGMTVIMACRSEEKANKAIELLKEEQPDSKDNYTNETLSSIIFCNRSGSPESYSRIVTVSSSAGKFGTINFEDLQSK

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A1B7YCL6	Short chain dehydrogenase/reductase dpchH OS=Colletotrichum higginsianum (strain IMI 349063) OX=759273 GN=dpchH PE=1 SV=1
A0A2H3D905	Short-chain dehydrogenase/reductase ARMGADRAFT_1018437 OS=Armillaria gallica OX=47427 GN=ARMGADRAFT_1018437 PE=1 SV=1
Q803A8	WW domain-containing oxidoreductase OS=Danio rerio OX=7955 GN=wwox PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0013776 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03534 all species →	SpvB	Salmonella virulence plasmid 65kDa B protein	Family	Interproscan
PF13517 all species →	FG-GAP_3	FG-GAP-like repeat	Repeat	Interproscan
PF05593 all species →	RHS_repeat	RHS Repeat	Repeat	Interproscan
PF00106 all species →	adh_short	short chain dehydrogenase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006530 all species →	Repeat	YD repeat	Interproscan
IPR003284 all species →	Family	Salmonella virulence plasmid 65kDa B protein	Interproscan
IPR028994 all species →	Homologous_superfamily	Integrin alpha, N-terminal	Interproscan
IPR013517 all species →	Repeat	FG-GAP repeat	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR050708 all species →	Family	Type VI secretion system VgrG/RHS	Interproscan
IPR031325 all species →	Repeat	RHS repeat	Interproscan
IPR002347 all species →	Family	Short-chain dehydrogenase/reductase SDR	Interproscan
IPR022385 all species →	Domain	Rhs repeat-associated core	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32305 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ19478.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.