Gene detail

Detailed information of KXJ19606.1 in Exaiptasia diaphana

Genomic Location: LJWW01000128.1:173128...183537
NR annotation: XP_020916893.1, kelch repeat-containing protein 2 isoform X1 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ19606.1

ATGGGTCAAGACCTTTCTAAACATAGCAAAGTGTCTGGAAGTTATGACTCTTTGCACCTCAACAAGCTAAAAAGTCTGCAATGTAATCGAGCTACCTCAAAATTTTCAGAGAAAGAGTTGAACAGTTTGATAAGATTATTCTACAATCTAGCAGCATTGTCTCCACAACATAATTACATTGATAAACCAACATTTGAACACTACTTCCCACTAGGAGGGATATTGGCTAGAAGGTTATTTGTAGCCTTTGACACAGATAGAAATGGTGTTATTGATCTTCAAGAATTTTTAGATGGTATGGCATTATGTCTTCAAGGGTCAGTGGATGAGAAGTACAAAATAGCATTTGAAATGTTTGACATTGACGAAACAAATGGTGTGGCACCTTGGGAATTGCATATGGTACTAAAATCTGTTCTTGCGACTACATCAAGATTATTAGAGAAAAGACTCAGTAAAAAAGAGTTATCTGAAGCAGAAATGGACTGCTTGGCGCATCGCATTGTGCAAGACGCCTTTAAGGAACAAACGCGAGATATGAACGGGGAAAGTAAAATGACTTTAAAAGTGTTCAAGACTTGGGTAGAGAAACATCCATTCGTCCTAGACTCGATATTTGGCCACAGTTGTCTCAAAGACAAGAACTTGCAGAAGCAGTACGCACGTCTAGGTAGCGAAGAAAACCTTGGTGGTTTGTCAGCGTCAGTGAAAAAACAAACATGGGTCAGTTCTTCATGGAATCAAAATGAACCTCGCTCTGCAACTAATACTTCGACAGGCAATTCCTATGCCAAATCAGACTATTTATGGAGTCCTGTGTTTGCTAAAATGAACGCCAAACCTTCCAAACGATGTAAACTTGCAGCTTGCGTCGTATATGATTCAGTGTTCGTTTACGGTGGGCGTGGTATATGCACGTCACTCAAGGATATGTGGAGATATGATATAGGTGAAAATACGTGGTTTCCTGTGGAAGAACGGGGAGAAAATCGACCTTCGTACCTTCAGGAACACACCATGCTATCTTATAAGAATAATTTAGTTGTTTTTGGAGGCGAGTTCACGTCATTGAATGAAACACCACTGTGGTTTTTTGACTTGCATACGTTCACGTGGTCGAAGCCATTTGGCGAACAGAAGGGACCTGTAAACCGTCGAGGTCACACGGCTGTCATTGCTGGCGATGTAATGTACGTTTTTGGTGGCTACATCGACCTTAGAGGCGCCTCAAAAGAACTGTGGAAATATGACTTTTCTACAAATGTTTGGACAAGAGAAACGATTCAGTCACGATGGCCAAGCCCGCGGTATTCCCATTCAGCGGTAGTATTTGATAGAAGTATGGTGATATTTGGTGGGTTGGAGGATATGCAGCTAAAAAATGACATGTGGCTCTGGAACATGGCGTCCTGTAAGTGGAGCAGAATAAAAGGCAAGAACTCTCCTCCTCCACTWTTCGGTCACACTGCAGTCAAGGTCGGCGATGGTATGATTATTTTTGGTGGAGAATCGACAGACGGGTCTTTGCACAACACTCTGTGGAGATTTAACTTTGATTCTCAATCATGGACTACTATTACACCCAAGGGTATGATATCTCCACCACCTAGAAGYTACCACTCCTTAGTCCAGATTCCTCATTTTATCTTTACGTCTCGACGTCCAACGTCTTCACGTTCCGCCCCGCCTTGCACGCCGGGATACGACCGTGAACTACCAAGACTTGGAGAAGGAAATGAACCCGACGAAGTTACCGAACTTGATATCGGTAAAACACTGAGCTCGGTGGTATCTCTCGGCTCTCTCGACTCGACAGCTTTACTCTCGCAAACTGACGATGAAATAGTACGAATTAAAGTGAGTACAACAGGTTCTCTGGATTCATTGATTCCTAACAAAAGTTTACGAGAAGCTGAGAACATGTCTATGACAAACCACGACAGAATATGTGACGTTAATGATGATGAAACTTTAGGTAGTGAAGAAAACACAACATTAAAACAYARTCATTCGTGTACAAAGCCTAAATCAGCTTCTATAAAAAAGACGAACAATTTATTAAAGCCCACCTATGGTGTGATATCACTACGGGAACAGCTCAAACCACAGAGTACGAATTATTTGTCACMMTCAACTAAAGCGACTTTTTGTCGYTCCACTCTCGACGAGGATGCAATGCAGTCAGCGATAGTTAATTTGATGGTACTTGGAGGGACGTCMAAGAGGGGGATAGAGAGTGTTGACCGATGGATCGATATGTGGAAATGTCAAATTGATCCAGAGAAACAARGCTCCGGTGTTAAGCGTATTGAAGTTGAATGTACCGAGCCTTCCCAATACAGCAGCACAAAGTCTTATGACAGCACAGTGGCATATGTGAACTTTAACATAACAGACAATKCAATTGATAATGAGTATTACGATGACAGCGACGAGAATGGTGACACAACTATCAAAGCTGAATGTGTATTGATGGATATGTTAGACGGAGACACAGACACACTTGATAAGACATTAGGYGATCAAACCGCTGTCCATAGTAATTCCATGACTACGGTCTCAATATAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9QXT8	Calsenilin OS=Mus musculus OX=10090 GN=Kcnip3 PE=1 SV=2
Q9JM47	Calsenilin OS=Rattus norvegicus OX=10116 GN=Kcnip3 PE=1 SV=1
Q17QD9	Calsenilin OS=Bos taurus OX=9913 GN=KCNIP3 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003991 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13418 all species →	Kelch_4	Galactose oxidase, central domain	Repeat	Interproscan
PF13415 all species →	Kelch_3	Galactose oxidase, central domain	Repeat	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR051568 all species →	Family	LZTR1/Attractin	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR030934 all species →	Domain	Intein C-terminal splicing region	Interproscan
IPR018247 all species →	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR002048 all species →	Domain	EF-hand domain	Interproscan
IPR011992 all species →	Homologous_superfamily	EF-hand domain pair	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46376 all species →	LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0005509 all species →	Molecular Function	calcium ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ19606.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.