Gene detail

Detailed information of KXJ22015.1 in Exaiptasia diaphana

Genomic Location: LJWW01000087.1:520028...521606
NR annotation: XP_020915660.1, UBA-like domain-containing protein 2 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5XGE4	UBA-like domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=ubald2 PE=2 SV=1
Q6IP57	UBA-like domain-containing protein 2-A OS=Xenopus laevis OX=8355 GN=ubald2-a PE=2 SV=1
Q8BQH4	UBA-like domain-containing protein 2 OS=Mus musculus OX=10090 GN=Ubald2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009691 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14555 all species →	UBA_4	UBA-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039310 all species →	Family	UBA-like domain-containing protein 1/2	Interproscan
IPR009060 all species →	Homologous_superfamily	UBA-like superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31993 all species →	UBA-LIKE DOMAIN-CONTAINING PROTEIN 2	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ22015.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ22015.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

70TPM > 0

2Conditions

222.8Max TPM

153.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	34	147.33	222.82
whole animal · symbiotic	36	36	159.48	218.46

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	222.82
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	221.90
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	215.52
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	180.96
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	173.45
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	173.32
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	165.80
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	161.15
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	160.63
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	158.49
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	156.37
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	155.30
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	153.68
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	153.63
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	153.09
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	152.87
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	151.50
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	149.83
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	148.28
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	148.07
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	147.19
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	146.37
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	145.53
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	144.80
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	143.83
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	143.51
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	140.42
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	139.92
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	138.11
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	136.27
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	132.17
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	131.26
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	130.25
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	127.41
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	218.46
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	195.79
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	194.18
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	190.25
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	186.92
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	186.03
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	184.44
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	181.23
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	177.22
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	175.41
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	173.78
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	173.57
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	169.07
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	165.37
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	164.74
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	161.28
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	158.65
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	158.64
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	155.20
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	153.58
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	151.35
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	147.22
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	146.93
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	146.86
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	146.60
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	146.24
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	145.04
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	142.52
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	140.74
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	138.91
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	138.34
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	137.41
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	135.54
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	129.44
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	116.79
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	107.39

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.