Gene detail

Detailed information of KXJ24200.1 in Exaiptasia diaphana

Genomic Location: LJWW01000056.1:625898...637288
NR annotation: KXJ24200.1, Vacuolar protein sorting-associated protein 4B [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0VD48	Vacuolar protein sorting-associated protein 4B OS=Bos taurus OX=9913 GN=VPS4B PE=2 SV=1
P46467	Vacuolar protein sorting-associated protein 4B OS=Mus musculus OX=10090 GN=Vps4b PE=1 SV=2
O75351	Vacuolar protein sorting-associated protein 4B OS=Homo sapiens OX=9606 GN=VPS4B PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001842 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00004 all species →	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF17862 all species →	AAA_lid_3	AAA+ lid domain	Domain	Interproscan
PF09336 all species →	Vps4_C	Vps4 C terminal oligomerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR050304 all species →	Family	Microtubule-severing AAA ATPase	Interproscan
IPR003959 all species →	Domain	ATPase, AAA-type, core	Interproscan
IPR041569 all species →	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593 all species →	Domain	AAA+ ATPase domain	Interproscan
IPR015415 all species →	Domain	Spastin/Vps4, C-terminal	Interproscan
IPR003960 all species →	Conserved_site	ATPase, AAA-type, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23074 all species →	AAA DOMAIN-CONTAINING	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007033 all species →	Biological Process	vacuole organization	Interproscan
GO:0016197 all species →	Biological Process	endosomal transport	Interproscan
GO:0140603 all species →	Molecular Function	obsolete ATP hydrolysis activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0016887 all species →	Molecular Function	ATP hydrolysis activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ24200.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.