Gene detail

Detailed information of KXJ24536.1 in Exaiptasia diaphana

Genomic Location: LJWW01000052.1:728391...743716
NR annotation: KXJ24536.1, Lipopolysaccharide-responsive and beige-like anchor protein [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

KXJ24536.1

ATGAAACACTTCGTGAGAAACCGTGTCCATCAACGAAAGAGCGAGATTTACCAAGCAGTAACTAACGTATGTCGTGTTATGCAGGATGTCCTCAAGCACGTTGAAGCACTCGAGCCAAGGTTTATATCCTCTCTAACGCAGGTCGATGGCCGATACGTSGGTCTACAAGTCGTTTCGCCCAATCGTTTTGARGTTAGCCTATTCCTTAACCAAATGGGGGTATTCAACTTTATCGATGATGGCTGTCCGTCKGGATGTGCCATGTTAAAGCTTAGTGATGAACGCAAAAGATCTATGTCGCTATGGACTGAGTTTATCACAGCGTCGGGTTATTTATCCGCGCGTAAGATGCGCTCAAGATTCACTTCGTTAGTTTCTGAAGCAATTCGCCGCGGTAGCTTGCAGTCCCAGGTCCGACTCATCTCAAGTAACAGCTTCTCTGCAGTTTTAAGTGTATCTGATACATATACAGTAGAACTTGTGCCTGCCTTTCGTTGTGGTTCTATATGGCCGCAGAATTCGTGTTCGTGGCCAACTATAGGCGCTGTATGGCCCAGCCAGCCAATCATTGCTAATGTCAAGATGAGAGGCTTTAACCTACTTGCACGAGATCCATACCCGACCTCTAAACCTGTAAATACCGAGGGAGATGCTTGGGTACTTTCGTTCACTGACGCAGAAGAACTTCTCATGACTGGTGGCTGTCGTAGAGTCTGTCTTAGTATGTTAAAGGCCTTGTGTGACAAACATCTAGTRATTCACGGTGAACCTATCGAGTACGCACACCTAACGAACTTAGTCTTGTACGAATGTGAAAAGCACCCGAGGGAATACGAGTGGGACGAAGAATCGCTATTTGATCGAATTAACGGCGTACTTCTCCAGTTAGTCTCCTGTCTACAGTGCAGAAAATGCCCTCACTTCTTCCTGAAAGGTGTTGACTTGTTCTCTGGGAAATCAAGATCTTCTTTAGACCAGGCGGCCAAACAAGTTCTTCTATATATGGAMGGTCTGCATGGCAAATGGTTTGTGGACCAAATCAAAGCTATATTTTCTAGACGATATTTACTTCAAAACTGTGCAGTGGAAATATTTTTTGCTAGTGGAACCTCAACACTATTCAAGTTTCCTGACCAGCAAACAGTGAAGAAAGCAGTAAGGGCGTTGCCCCCTGTGGGTGTAGGGTCATACTATGGCATAACACAAACAAGAGCTGCATCTCTTTTTTCTCCTAAACAACTGTTCCAGAAATCYACTATGACAAGTAGATGGCAGCGTGGGGAGATTGATAACTTCCAGTACTTGATGTTCCTCAACACTATTGCAGGTCGAACGTATTGTGATTTGAACCAATATCCCGTGTTTCCTTGGGTTTTAACGAACTACGAGTCCACAACATTAGATCTAAAAGACCCTGCTAATTACAGGGATTTGTCCAAGCCTATCGGTGCTCTAAATCCCAATCGTCACGGCCAGTTCTTRGAGCGCTATGCATCATGGGACGAGAACGATGACATCCCTCCATTTCATTATGGTACACACTATTCAACGTCAGGCTTCACGTTGGCATGGTTAATAAGACTGGAACCTTTCGCTACTCAGTTTCTCAATCTTCAAGGRGGTAAATTTGATCATCCWGGACGAACATTCTGCTCGATTGCTACAGCCTGGAAAAACTGTCAAAGAGATACGTCTGACGTCAAGGAGCTCATCCCAGAACTGTTCTATTTACCAGAAATGTTTCTSAACGATAACAGACTCGATTCTATTTTCGTGATATTTCAGTTCACTTTTGGAGTAGATGACGATGGTACGGTCATTGATGATGTTGAACTCCCACCATGGGCTTCCTCTGTCGACCACTTCATCGCGATGCATAAAGCGGCACTTGAATCAGACTACGTCTCATTGCATTTACACGAGTGGGTAGACTTAATATTTGGCTTCAAACAAAGAGGTCCAGAGGCTGTCAAAGCAACCAATGTATTTTTTCACCTGACTTAYGAAGGAAGTGTCGACTTGGACGCYATTAGTGACTCTGTTATGARAGAGGCTGTACAACAGCAAATAAAGAGCTTTGGACAAACTCCTTCTCAGCTTCTGCTTGAGCCCCATCCAGCGCGTGTTTCATTTGACTTAGTACAGGCTCAACTGAATCAAGAACCATTTAAAAGTATTTATCTGACGTTCAAAGTCACAGAAAACGTACCAGTGACTTTTGTCGCAGCTCATACTGACGTGAATCAAATGTACCCTGCAGTTGTTACCATCAGCTGTAATCAGTGTTTCTCGCTCAATCGCTGGATTAACACAGATTCTGCGCAGAGTCTTCGTGGAGCACAGATTGAACAAGATCCAATGTTAGCCACACCAACAGGGCGCCATCGAAGACAGCTAGGGGAACCTCTAGACCAAACTGTCACCCCCAGTGCGTCGTGTTTTGTAGTGACCAATGACAACAGGACAATAATGGCGTGTGGGTACTGGGATAACAGTTTTAAATGCTTCTCATCTGATAGTGAGGGACCATGTTTAGTTCATACTATTACTGGAGATCGTCTTCATATTCTACACGGCCCGCAAGATTGTATAAGACCACGGCTGGTTCGTGTCGTCCAATCAGGGTTAATTGTCGTTAGTTATACCGATAATACAGGGCATTTAGCTGTCTTTACTATCAATGGTAAAATGCTAGAAGCAAAGCGACTGGATGACCATGTACTGGTTGTTGTTGTTGTTGTTGTTGTTGCTGCTGCTGTCGTAGTTTTTATTGTTTTTGTTGTGGGAAGTGGTGGTGGCGGTGGTAGTGCTGTTGTGGTGGTTGTTGCTGTTGTTGTTGGTGGTGGTAGTGCTGTTGTGGTTGTTGTTGCTGTTGTTGTTAAAGGTGGTGGTGGTGGTAGTGCTGTTGTGGTTGTTGTTGCTGTTGTTGTTGGTGGTGGTGGTGTTGTTGTGGTTGTTGTTGTTTCTGTTGTTGATGATGATGCCGTGGTTATTGTCAATGATGTTGCTGTTTGCTAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P50851	Lipopolysaccharide-responsive and beige-like anchor protein OS=Homo sapiens OX=9606 GN=LRBA PE=1 SV=4
Q9ESE1	Lipopolysaccharide-responsive and beige-like anchor protein OS=Mus musculus OX=10090 GN=Lrba PE=1 SV=1
Q8NFP9	Neurobeachin OS=Homo sapiens OX=9606 GN=NBEA PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002584 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14844 all species →	PH_BEACH	PH domain associated with Beige/BEACH	Domain	Interproscan
PF02138 all species →	Beach	Beige/BEACH domain	Family	Interproscan
PF03281 all species →	Mab-21	Mab-21 protein nucleotidyltransferase domain	Domain	Interproscan
PF20266 all species →	Mab-21_C	Mab-21 protein HhH/H2TH-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023362 all species →	Domain	PH-BEACH domain	Interproscan
IPR000409 all species →	Domain	BEACH domain	Interproscan
IPR036372 all species →	Homologous_superfamily	BEACH domain superfamily	Interproscan
IPR024810 all species →	Family	MAB21L/Cyclic GMP-AMP synthase-like receptor	Interproscan
IPR046903 all species →	Domain	Mab-21-like, nucleotidyltransferase domain	Interproscan
IPR050865 all species →	Family	BEACH Domain-Containing	Interproscan
IPR046906 all species →	Domain	Mab-21-like, HhH/H2TH-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13743 all species →	BEIGE/BEACH-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0008104 all species →	Biological Process	protein localization	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0019901 all species →	Molecular Function	protein kinase binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for KXJ24536.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.