Gene detail

Detailed information of KXJ27585.1 in Exaiptasia diaphana

Genomic Location: LJWW01000019.1:742141...750178
NR annotation: XP_020896063.1, flotillin-2a [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q14254	Flotillin-2 OS=Homo sapiens OX=9606 GN=FLOT2 PE=1 SV=2
Q60634	Flotillin-2 OS=Mus musculus OX=10090 GN=Flot2 PE=1 SV=2
Q9Z2S9	Flotillin-2 OS=Rattus norvegicus OX=10116 GN=Flot2 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001682 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF15975 all species →	Flot	Flotillin	Family	Interproscan
PF01145 all species →	Band_7	SPFH domain / Band 7 family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001107 all species →	Domain	Band 7 domain	Interproscan
IPR031905 all species →	Domain	Flotillin, C-terminal domain	Interproscan
IPR036013 all species →	Homologous_superfamily	Band 7/SPFH domain superfamily	Interproscan
IPR027705 all species →	Family	Flotillin family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13806 all species →	FLOTILLIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0016600 all species →	Cellular Component	flotillin complex	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0045661 all species →	Biological Process	regulation of myoblast differentiation	Interproscan
GO:0072659 all species →	Biological Process	protein localization to plasma membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07192	FLOT; flotillin	-	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ27585.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

72TPM > 0

2Conditions

509.7Max TPM

268.5Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	36	278.03	509.68
whole animal · symbiotic	36	36	258.88	307.05

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	509.68
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	313.77
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	313.50
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	301.43
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	300.78
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	295.89
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	295.66
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	294.73
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	292.55
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	286.84
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	285.66
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	284.86
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	283.87
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	283.51
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	280.74
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	280.02
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	280.01
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	277.04
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	275.78
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	274.02
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	273.66
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	270.57
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	270.35
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	269.39
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	267.45
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	258.54
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	249.37
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	246.47
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	243.22
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	241.98
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	239.01
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	239.01
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	238.25
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	235.95
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	230.81
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	224.77
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	307.05
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	300.80
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	299.60
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	299.37
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	295.78
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	294.77
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	291.21
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	285.10
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	272.16
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	269.69
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	269.20
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	265.47
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	265.33
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	259.07
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	258.98
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	254.78
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	253.25
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	252.80
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	251.89
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	250.40
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	248.72
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	243.78
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	243.69
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	242.81
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	240.91
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	240.65
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	240.21
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	240.19
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	239.97
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	238.95
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	237.90
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	237.39
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	234.12
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	234.07
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	233.00
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	226.77

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.