Gene detail

Detailed information of KXJ27756.1 in Exaiptasia diaphana

Genomic Location: LJWW01000017.1:462966...467411
NR annotation: XP_020894672.1, D-amino-acid oxidase isoform X1 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A499UB99	D-amino-acid oxidase OS=Talaromyces emersonii OX=68825 GN=DAO1 PE=1 SV=1
Q99042	D-amino-acid oxidase OS=Trigonopsis variabilis OX=34364 GN=DAO1 PE=1 SV=1
P24552	D-amino-acid oxidase OS=Fusarium vanettenii OX=2747968 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001334 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01266 all species →	DAO	FAD dependent oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006181 all species →	Conserved_site	D-amino acid oxidase, conserved site	Interproscan
IPR023209 all species →	Family	D-amino-acid oxidase	Interproscan
IPR006076 all species →	Domain	FAD dependent oxidoreductase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11530 all species →	D-AMINO ACID OXIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003884 all species →	Molecular Function	D-amino-acid oxidase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0019478 all species →	Biological Process	D-amino acid catabolic process	Interproscan
GO:0046416 all species →	Biological Process	D-amino acid metabolic process	Interproscan
GO:0071949 all species →	Molecular Function	FAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00273	DAO, aao; D-amino-acid oxidase	EC:1.4.3.3	Peroxisome	ko04146	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ27756.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

62TPM > 0

2Conditions

17.0Max TPM

8.8Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	32	9.77	16.97
whole animal · symbiotic	36	30	7.82	15.26

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	16.97
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	16.79
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	15.68
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	15.59
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	14.48
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	14.47
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.94
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.28
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.25
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.93
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.62
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.58
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.57
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.25
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.19
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.71
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.78
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.77
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	9.44
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	9.44
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.81
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.69
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.59
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.59
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.54
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.41
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	7.37
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	7.02
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	6.71
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	6.47
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	6.43
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	4.34
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	15.26
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	13.31
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	13.05
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.64
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.27
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	11.96
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	11.20
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.75
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.67
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.29
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.28
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.26
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	9.77
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	9.51
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	9.01
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.84
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.70
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.60
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.56
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.47
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.25
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.20
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	7.88
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	7.50
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	7.38
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	6.76
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	6.69
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.99
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	5.47
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	4.11
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.