Gene detail

Detailed information of KXJ27784.1 in Exaiptasia diaphana

Genomic Location: LJWW01000017.1:962118...966366
NR annotation: KXJ27784.1, Endoplasmic reticulum resident protein 29 [Exaiptasia diaphana]
Species Exaiptasia diaphana · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P52555	Endoplasmic reticulum resident protein 29 OS=Rattus norvegicus OX=10116 GN=Erp29 PE=1 SV=2
P57759	Endoplasmic reticulum resident protein 29 OS=Mus musculus OX=10090 GN=Erp29 PE=1 SV=2
P81623	Endoplasmic reticulum resident protein 29 OS=Bos taurus OX=9913 GN=ERP29 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009128 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07912 all species →	ERp29_N	ERp29, N-terminal domain	Domain	Interproscan
PF07749 all species →	ERp29	Endoplasmic reticulum protein ERp29, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012883 all species →	Domain	ERp29, N-terminal	Interproscan
IPR036249 all species →	Homologous_superfamily	Thioredoxin-like superfamily	Interproscan
IPR036356 all species →	Homologous_superfamily	Endoplasmic reticulum resident protein 29, C-terminal domain superfamily	Interproscan
IPR016855 all species →	Family	Endoplasmic reticulum resident protein 29	Interproscan
IPR011679 all species →	Domain	Endoplasmic reticulum resident protein 29, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12211 all species →	ENDOPLASMIC RETICULUM PROTEIN ERP29	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005788 all species →	Cellular Component	endoplasmic reticulum lumen	Interproscan
GO:0009306 all species →	Biological Process	protein secretion	Interproscan
GO:0005783 all species →	Cellular Component	endoplasmic reticulum	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09586	ERP29; endoplasmic reticulum protein 29	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern (RNA-seq)

Transcript abundance of KXJ27784.1 across 72 RNA-seq samples of Exaiptasia diaphana. Values are TPM (transcripts per million) from the StringTie quantification; one bar is one sample, grouped and coloured by condition, sorted by expression within each group.

72Samples

63TPM > 0

2Conditions

82.0Max TPM

12.4Mean TPM

By condition

Condition	Samples	TPM > 0	Mean TPM	Max TPM	Mean, relative to max
whole animal · aposymbiotic	36	31	11.60	46.62
whole animal · symbiotic	36	32	13.16	81.97

Per sample · hover a bar for the full sample record · show / hide the sample table

SRA run	Condition	Tissue	Developmental stage	Treatment	Study	TPM
SRR6202357	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	46.62
SRR6202236	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	16.59
SRR6202260	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	16.17
SRR6202239	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	15.53
SRR6202212	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	15.37
SRR6202261	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	14.75
SRR6202255	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	14.70
SRR6202211	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.99
SRR6202203	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.69
SRR6202241	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.54
SRR6202235	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.25
SRR6202256	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.19
SRR6202363	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	13.01
SRR6202258	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.92
SRR6202234	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.69
SRR6202237	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.68
SRR6202204	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	12.11
SRR6202238	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.93
SRR6202233	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.90
SRR6202210	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.60
SRR6202208	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.57
SRR6202254	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.15
SRR6202259	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	11.08
SRR6202257	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.72
SRR6202240	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.62
SRR6202346	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.58
SRR6202242	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.41
SRR6202207	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	10.26
SRR6202209	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	9.95
SRR6202205	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	8.01
SRR6202206	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	7.04
SRR6202343	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202344	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202345	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202358	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202364	whole animal · aposymbiotic	whole animal	not recorded	aposymbiotic	SRP120942	0.00
SRR6202349	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	81.97
SRR6202347	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	27.44
SRR6202356	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	19.25
SRR6202281	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	18.32
SRR6202280	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	15.90
SRR6202306	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	15.26
SRR6202351	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	15.24
SRR6202355	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	15.03
SRR6202352	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	14.33
SRR6202305	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	13.52
SRR6202303	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	13.43
SRR6202278	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	13.37
SRR6202350	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	13.08
SRR6202337	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.57
SRR6202285	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.53
SRR6202283	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.49
SRR6202338	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.48
SRR6202277	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	12.30
SRR6202282	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	11.45
SRR6202341	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	11.42
SRR6202263	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	11.23
SRR6202304	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	11.20
SRR6202276	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.93
SRR6202309	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.52
SRR6202262	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.33
SRR6202340	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	10.29
SRR6202308	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	9.10
SRR6202339	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	9.10
SRR6202279	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	8.22
SRR6202284	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	7.47
SRR6202307	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	7.02
SRR6202310	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	6.94
SRR6202342	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202348	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202353	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00
SRR6202354	whole animal · symbiotic	whole animal	not recorded	symbiotic	SRP120942	0.00

Source: CnidoSite RNA-seq expression matrices (EDIAP_TPM, StringTie quantification over 72 runs), joined to SRA sample metadata. Samples whose tissue/treatment is not recorded in the source metadata are grouped by the descriptor carried in the expression matrix itself.