Detailed information of OS493_000018-T1 in Lophelia pertusa

Genomic Location: scaffold_1:228071...228546
NR annotation: KAJ7394216.1, hypothetical protein OS493_000018 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0DG35Glutamate synthase 2 [NADH], chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0555600 PE=2 SV=2
Q03460Glutamate synthase [NADH], amyloplastic OS=Medicago sativa OX=3879 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00310
all species →		GATase_2Glutamine amidotransferases class-IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR017932
all species →		DomainGlutamine amidotransferase type 2 domainInterproscan

 PANTHER
No PANTHER signature was detected for OS493_000018-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for OS493_000018-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000018-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000018-T1 global co-expression network
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