Detailed information of OS493_000019-T1 in Lophelia pertusa

Genomic Location: scaffold_1:229362...230596
NR annotation: KAJ7394217.1, glutamate synthase [NADH] [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9C102Glutamate synthase [NADH] OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=glt1 PE=1 SV=1
Q12680Glutamate synthase [NADH] OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=GLT1 PE=1 SV=2
Q9LV03Glutamate synthase 1 [NADH], chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GLT1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00310
all species →		GATase_2Glutamine amidotransferases class-IIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR029055
all species →		Homologous_superfamilyNucleophile aminohydrolases, N-terminalInterproscan
IPR050711
all species →		FamilyElectron transfer and nitrogen metabolism enzymeInterproscan
IPR017932
all species →		DomainGlutamine amidotransferase type 2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11938
all species →		FAD NADPH DEHYDROGENASE/OXIDOREDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006537
all species →		Biological Processglutamate biosynthetic processInterproscan
GO:0015930
all species →		Molecular Functionglutamate synthase activityInterproscan
GO:0016040
all species →		Molecular Functionglutamate synthase (NADH) activityInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0019676
all species →		Biological Processammonia assimilation cycleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000019-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000019-T1 global co-expression network
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