Gene detail

Detailed information of OS493_000063-T1 in Lophelia pertusa

Genomic Location: scaffold_1:682529...688282
NR annotation: KAJ7394261.1, hypothetical protein OS493_000063 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q0II59	Pyridoxal kinase OS=Bos taurus OX=9913 GN=PDXK PE=2 SV=1
P82197	Pyridoxal kinase OS=Ovis aries OX=9940 GN=PDXK PE=1 SV=1
O00764	Pyridoxal kinase OS=Homo sapiens OX=9606 GN=PDXK PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004079 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08543 all species →	Phos_pyr_kin	Phosphomethylpyrimidine kinase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029056 all species →	Homologous_superfamily	Ribokinase-like	Interproscan
IPR013749 all species →	Domain	Pyridoxamine kinase/Phosphomethylpyrimidine kinase	Interproscan
IPR004625 all species →	Family	Pyridoxine kinase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10534 all species →	PYRIDOXAL KINASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008478 all species →	Molecular Function	pyridoxal kinase activity	Interproscan
GO:0009443 all species →	Biological Process	pyridoxal 5'-phosphate salvage	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for OS493_000063-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_000063-T1 global co-expression network