Detailed information of OS493_000065-T1 in Lophelia pertusa

Genomic Location: scaffold_1:699713...701708
NR annotation: KAJ7394263.1, hypothetical protein OS493_000065 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q9SEE4Pirin-like protein OS=Solanum lycopersicum OX=4081 PE=2 SV=1
Q9ZW82Pirin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PRN2 PE=1 SV=3
Q9LX49Pirin-1 OS=Arabidopsis thaliana OX=3702 GN=PRN1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005996 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_000065-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011051
all species →		Homologous_superfamilyRmlC-like cupin domain superfamilyInterproscan
IPR014710
all species →		Homologous_superfamilyRmlC-like jelly roll foldInterproscan
IPR012093
all species →		FamilyPirinInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13903
all species →		PIRIN-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_000065-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000065-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000065-T1 global co-expression network
TOP