Gene detail

Detailed information of OS493_000068-T1 in Lophelia pertusa

Genomic Location: scaffold_1:718184...730136
NR annotation: KAJ7394266.1, NADP-dependent malic enzyme [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P28227	NADP-dependent malic enzyme OS=Anas platyrhynchos OX=8839 GN=ME1 PE=1 SV=1
Q16798	NADP-dependent malic enzyme, mitochondrial OS=Homo sapiens OX=9606 GN=ME3 PE=1 SV=2
P40927	NADP-dependent malic enzyme OS=Columba livia OX=8932 GN=ME1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003836 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03949 all species →	Malic_M	Malic enzyme, NAD binding domain	Domain	Interproscan
PF00390 all species →	malic	Malic enzyme, N-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046346 all species →	Homologous_superfamily	Aminoacid dehydrogenase-like, N-terminal domain superfamily	Interproscan
IPR001891 all species →	Family	Malic oxidoreductase	Interproscan
IPR037062 all species →	Homologous_superfamily	Malic enzyme, N-terminal domain superfamily	Interproscan
IPR012302 all species →	Domain	Malic enzyme, NAD-binding	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR012301 all species →	Domain	Malic enzyme, N-terminal domain	Interproscan
IPR015884 all species →	Conserved_site	Malic enzyme, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23406 all species →	MALIC ENZYME-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004470 all species →	Molecular Function	malic enzyme activity	Interproscan
GO:0004473 all species →	Molecular Function	malate dehydrogenase (decarboxylating) (NADP+) activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006090 all species →	Biological Process	pyruvate metabolic process	Interproscan
GO:0006108 all species →	Biological Process	malate metabolic process	Interproscan
GO:0016616 all species →	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0051287 all species →	Molecular Function	NAD binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00029	maeB; malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+)	EC:1.1.1.40	PPAR signaling pathway	ko03320	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Expression pattern

Expression trend for OS493_000068-T1 global co-expression network