Detailed information of OS493_000079-T1 in Lophelia pertusa

Genomic Location: scaffold_1:950572...958191
NR annotation: KAJ7394277.1, Trafficking protein particle complex subunit 10 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003366 (this species only)

 Pfam domain
No Pfam domain signature was detected for OS493_000079-T1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR045126
all species →		FamilyTrafficking protein particle complex subunit TRAPPC10/Trs130Interproscan
IPR017868
all species →		RepeatFilamin/ABP280 repeat-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13251
all species →		EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006891
all species →		Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0034498
all species →		Biological Processearly endosome to Golgi transportInterproscan
GO:0048193
all species →		Biological ProcessGolgi vesicle transportInterproscan
GO:1990071
all species →		Cellular ComponentTRAPPII protein complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000079-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000079-T1 global co-expression network
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