Detailed information of OS493_000233-T1 in Lophelia pertusa

Genomic Location: scaffold_1:2621738...2622928
NR annotation: KAJ7394424.1, ATP-dependent RNA helicase ddx18 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q54S03Probable ATP-dependent RNA helicase ddx18 OS=Dictyostelium discoideum OX=44689 GN=ddx18 PE=3 SV=1
P0CQ84ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=HAS1 PE=3 SV=2
P0CQ85ATP-dependent RNA helicase HAS1 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=HAS1 PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005371 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13959
all species →		DUF4217Domain of unknown function (DUF4217)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR025313
all species →		DomainDomain of unknown function DUF4217Interproscan

 PANTHER
No PANTHER signature was detected for OS493_000233-T1. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
No Gene Ontology signature was detected for OS493_000233-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000233-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000233-T1 global co-expression network
TOP