Detailed information of OS493_000451-T1 in Lophelia pertusa

Genomic Location: scaffold_1:5381992...5401260
NR annotation: KAJ7394632.1, calcium ion binding [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P49013Fibropellin-3 OS=Strongylocentrotus purpuratus OX=7668 GN=EGF3 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006031 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00008
all species →		EGFEGF-like domainDomainInterproscan
PF03160
all species →		Calx-betaCalx-beta domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038081
all species →		Homologous_superfamilyCalX-like domain superfamilyInterproscan
IPR013320
all species →		Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR003644
all species →		DomainNa-Ca exchanger/integrin-beta4Interproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR026919
all species →		FamilyAdhesion G-protein coupled receptor V1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46682
all species →		ADHESION G-PROTEIN COUPLED RECEPTOR V1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0007154
all species →		Biological Processcell communicationInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0001965
all species →		Molecular FunctionG-protein alpha-subunit bindingInterproscan
GO:0004930
all species →		Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0007194
all species →		Biological Processnegative regulation of adenylate cyclase activityInterproscan
GO:0010855
all species →		Molecular Functionadenylate cyclase inhibitor activityInterproscan
GO:0071277
all species →		Biological Processcellular response to calcium ionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000451-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000451-T1 global co-expression network
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