Detailed information of OS493_000516-T1 in Lophelia pertusa

Genomic Location: scaffold_1:6994815...6998542
NR annotation: KAJ7394691.1, hypothetical protein OS493_000516 [Desmophyllum pertusum]
Species abbreviation LPERT · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006402 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02017
all species →		CIDE-NCIDE-N domainDomainInterproscan
PF09033
all species →		DFF-CDNA Fragmentation factor 45kDa, C terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003508
all species →		DomainCIDE-N domainInterproscan
IPR015121
all species →		DomainDNA fragmentation factor 45kDa, middle domainInterproscan
IPR027296
all species →		Homologous_superfamilyDNA fragmentation factor 45kDa, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12306
all species →		CELL DEATH ACTIVATOR CIDEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006915
all species →		Biological Processapoptotic processInterproscan
GO:0042981
all species →		Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02310DFFA, DFF45; DNA fragmentation factor, 45 kD, alpha subunit-Apoptosisko04210deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000516-T1 global co-expression network
TOP