Detailed information of OS493_000786-T1 in Lophelia pertusa

Genomic Location: scaffold_2:197988...198851
NR annotation: KAJ7387457.1, Family of unknown function (DUF716) [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q497B2Transmembrane protein 45B OS=Rattus norvegicus OX=10116 GN=Tmem45b PE=1 SV=1
Q8VCZ2Transmembrane protein 45B OS=Mus musculus OX=10090 GN=Tmem45b PE=1 SV=1
Q3T130Transmembrane protein 45B OS=Bos taurus OX=9913 GN=TMEM45B PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002374 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04819
all species →		DUF716Family of unknown function (DUF716) FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR042127
all species →		FamilyTransmembrane protein 45Interproscan
IPR006904
all species →		FamilyProtein of unknown function DUF716Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16007
all species →		EPIDIDYMAL MEMBRANE PROTEIN E9-RELATEDInterproscan

 Gene Ontology
No Gene Ontology signature was detected for OS493_000786-T1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_000786-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_000786-T1 global co-expression network
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