Detailed information of OS493_001095-T1 in Lophelia pertusa

Genomic Location: scaffold_2:4521587...4527272
NR annotation: KAJ7387752.1, Alpha/beta hydrolase domain-containing protein 11 [Desmophyllum pertusum]
Species Lophelia pertusa · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q5QNI2Sodium/calcium exchanger NCL1 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL1 PE=2 SV=1
Q6K3R5Sodium/calcium exchanger NCL2 OS=Oryza sativa subsp. japonica OX=39947 GN=NCL2 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003989 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01699
all species →		Na_Ca_exSodium/calcium exchanger proteinFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004713
all species →		FamilyCalcium/proton exchangerInterproscan
IPR004837
all species →		DomainSodium/calcium exchanger membrane regionInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR31503
all species →		VACUOLAR CALCIUM ION TRANSPORTERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0006812
all species →		Biological Processmonoatomic cation transportInterproscan
GO:0006874
all species →		Biological Processintracellular calcium ion homeostasisInterproscan
GO:0008324
all species →		Molecular Functionmonoatomic cation transmembrane transporter activityInterproscan
GO:0015369
all species →		Molecular Functioncalcium:proton antiporter activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0070588
all species →		Biological Processcalcium ion transmembrane transportInterproscan
GO:0055085
all species →		Biological Processtransmembrane transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for OS493_001095-T1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
Expression pattern
 Expression trend for OS493_001095-T1 global co-expression network
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